Non-coding driver mutations in human cancer

K Elliott, E Larsson - Nature Reviews Cancer, 2021 - nature.com
Tumour formation involves random mutagenic events and positive evolutionary selection
acting on a subset of such events, referred to as driver mutations. A decade of careful …

A compendium of mutational cancer driver genes

F Martínez-Jiménez, F Muiños, I Sentís… - Nature Reviews …, 2020 - nature.com
A fundamental goal in cancer research is to understand the mechanisms of cell
transformation. This is key to developing more efficient cancer detection methods and …

OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations

L Mularoni, R Sabarinathan, J Deu-Pons… - Genome biology, 2016 - Springer
Distinguishing the driver mutations from somatic mutations in a tumor genome is one of the
major challenges of cancer research. This challenge is more acute and far from solved for …

[PDF][PDF] Universal patterns of selection in cancer and somatic tissues

I Martincorena, KM Raine, M Gerstung, KJ Dawson… - Cell, 2017 - cell.com
Cancer develops as a result of somatic mutation and clonal selection, but quantitative
measures of selection in cancer evolution are lacking. We adapted methods from molecular …

Co-occurrence and mutual exclusivity: what cross-cancer mutation patterns can tell us

G El Tekle, T Bernasocchi, AM Unni, F Bertoni, D Rossi… - Trends in cancer, 2021 - cell.com
Cancer is the dysregulated proliferation of cells caused by acquired mutations in key driver
genes. The most frequently mutated driver genes promote tumorigenesis in various …

Driver and passenger mutations in cancer

JR Pon, MA Marra - Annual Review of Pathology: Mechanisms …, 2015 - annualreviews.org
Next-generation sequencing has allowed identification of millions of somatic mutations and
epigenetic changes in cancer cells. A key challenge in interpreting cancer genomes and …

Identification of cancer driver genes based on nucleotide context

F Dietlein, D Weghorn, A Taylor-Weiner, A Richters… - Nature …, 2020 - nature.com
Cancer genomes contain large numbers of somatic mutations but few of these mutations
drive tumor development. Current approaches either identify driver genes on the basis of …

Comprehensive identification of mutational cancer driver genes across 12 tumor types

D Tamborero, A Gonzalez-Perez, C Perez-Llamas… - Scientific reports, 2013 - nature.com
With the ability to fully sequence tumor genomes/exomes, the quest for cancer driver genes
can now be undertaken in an unbiased manner. However, obtaining a complete catalog of …

'Latent drivers' expand the cancer mutational landscape

R Nussinov, CJ Tsai - Current Opinion in Structural Biology, 2015 - Elsevier
Highlights•Currently mutations are classified into drivers and passengers.•We suggest an
additional 'latent driver'classification.•Latent driver mutations behave as passengers and do …

Phase and context shape the function of composite oncogenic mutations

AN Gorelick, FJ Sánchez-Rivera, Y Cai, CM Bielski… - Nature, 2020 - nature.com
Cancers develop as a result of driver mutations, that lead to clonal outgrowth and the
evolution of disease,. The discovery and functional characterization of individual driver …