[HTML][HTML] Fold-change detection in biological systems

M Adler, U Alon - Current Opinion in Systems Biology, 2018 - Elsevier
Many sensory systems in cells and organisms share a recurring property called fold-change
detection (FCD). FCD describes a system whose dynamics–including amplitude and …

[HTML][HTML] Logarithmic and power law input-output relations in sensory systems with fold-change detection

M Adler, A Mayo, U Alon - PLoS computational biology, 2014 - journals.plos.org
Two central biophysical laws describe sensory responses to input signals. One is a
logarithmic relationship between input and output, and the other is a power law relationship …

[HTML][HTML] Optimal regulatory circuit topologies for fold-change detection

M Adler, P Szekely, A Mayo, U Alon - Cell systems, 2017 - cell.com
Evolution repeatedly converges on only a few regulatory circuit designs that achieve a given
function. This simplicity helps us understand biological networks. However, why so few …

[HTML][HTML] The incoherent feedforward loop can provide fold-change detection in gene regulation

L Goentoro, O Shoval, MW Kirschner, U Alon - Molecular cell, 2009 - cell.com
Many sensory systems (eg, vision and hearing) show a response that is proportional to the
fold-change in the stimulus relative to the background, a feature related to Weber's Law …

Fold-change detection and scalar symmetry of sensory input fields

O Shoval, L Goentoro, Y Hart, A Mayo… - Proceedings of the …, 2010 - National Acad Sciences
Recent studies suggest that certain cellular sensory systems display fold-change detection
(FCD): a response whose entire shape, including amplitude and duration, depends only on …

Oscillatory stimuli differentiate adapting circuit topologies

SJ Rahi, J Larsch, K Pecani, AY Katsov, N Mansouri… - Nature …, 2017 - nature.com
Biology emerges from interactions between molecules, which are challenging to elucidate
with current techniques. An orthogonal approach is to probe for'response signatures' that …

[HTML][HTML] The utility of paradoxical components in biological circuits

Y Hart, U Alon - Molecular cell, 2013 - cell.com
A recurring theme in biological circuits is the existence of components that are
antagonistically bifunctional, in the sense that they simultaneously have two opposing …

Synthetic circuit for exact adaptation and fold-change detection

J Kim, I Khetarpal, S Sen, RM Murray - Nucleic acids research, 2014 - academic.oup.com
Biological organisms use their sensory systems to detect changes in their environment. The
ability of sensory systems to adapt to static inputs allows wide dynamic range as well as …

Allosteric proteins as logarithmic sensors

N Olsman, L Goentoro - Proceedings of the National …, 2016 - National Acad Sciences
Many sensory systems, from vision and hearing in animals to signal transduction in cells,
respond to fold changes in signal relative to background. Responding to fold change …

Response rescaling in bacterial chemotaxis

MD Lazova, T Ahmed, D Bellomo… - Proceedings of the …, 2011 - National Acad Sciences
Sensory systems rescale their response sensitivity upon adaptation according to simple
strategies that recur in processes as diverse as single-cell signaling, neural network …