UCSF ChimeraX is the next‐generation interactive visualization program from the Resource
for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX …

UCSF ChimeraX is next‐generation software for the visualization and analysis of molecular
structures, density maps, 3D microscopy, and associated data. It addresses challenges in …

The design, implementation, and capabilities of an extensible visualization system, UCSF
Chimera, are discussed. Chimera is segmented into a core that provides basic services and …

structureViz is a Cytoscape plug-in that links the visualization of biological networks
provided by Cytoscape with the visualization and analysis of macromolecular structures and …

Background Comparing related structures and viewing the structures in the context of
sequence alignments are important tasks in protein structure-function research. While many …

Integrating access to web services with desktop applications allows for an expanded set of
application features, including performing computationally intensive tasks and convenient …

Many structures of large molecular assemblies such as virus capsids and ribosomes have
been experimentally determined to atomic resolution. We consider four software problems …

Structural modeling of macromolecular complexes greatly benefits from interactive
visualization capabilities. Here we present the integration of several modeling tools into …

One of the main goals when creating a new application is to make it available to a large
audience. Two (but by no means the only two) technological criteria for evaluating the …

Visualization of molecular structures is one of the most common tasks carried out by
structural biologists, typically using software, such as Chimera, COOT, PyMOL, or VMD. In …