Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage

D Aran, AP Looney, L Liu, E Wu, V Fong, A Hsu… - Nature …, 2019 - nature.com
Tissue fibrosis is a major cause of mortality that results from the deposition of matrix proteins
by an activated mesenchyme. Macrophages accumulate in fibrosis, but the role of specific …

Multiple fibroblast subtypes contribute to matrix deposition in pulmonary fibrosis

X Liu, K Dai, X Zhang, G Huang, H Lynn… - American Journal of …, 2023 - atsjournals.org
Progressive pulmonary fibrosis results from a dysfunctional tissue repair response and is
characterized by fibroblast proliferation, activation, and invasion and extracellular matrix …

Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis

TS Adams, JC Schupp, S Poli, EA Ayaub… - Science …, 2020 - science.org
We provide a single-cell atlas of idiopathic pulmonary fibrosis (IPF), a fatal interstitial lung
disease, by profiling 312,928 cells from 32 IPF, 28 smoker and nonsmoker controls, and 18 …

Defining the activated fibroblast population in lung fibrosis using single-cell sequencing

R Peyser, S MacDonnell, Y Gao, L Cheng… - American journal of …, 2019 - atsjournals.org
Idiopathic pulmonary fibrosis (IPF) is a progressive and fatal lung disorder driven by
unrelenting extracellular matrix deposition. Fibroblasts are recognized as the central …

[PDF][PDF] Single-cell deconvolution of fibroblast heterogeneity in mouse pulmonary fibrosis

T Xie, Y Wang, N Deng, G Huang, F Taghavifar… - Cell reports, 2018 - cell.com
Fibroblast heterogeneity has long been recognized in mouse and human lungs,
homeostasis, and disease states. However, there is no common consensus on fibroblast …

Integrated analysis of single-cell and bulk RNA sequencing reveals pro-fibrotic PLA2G7high macrophages in pulmonary fibrosis

J Wang, M Jiang, A Xiong, L Zhang, L Luo, Y Liu… - Pharmacological …, 2022 - Elsevier
Pulmonary fibrosis (PF) is the pathological change of end-stage interstitial lung diseases
with high mortality and limited therapeutic options. Lung macrophages have distinct subsets …

Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis

PA Reyfman, JM Walter, N Joshi… - American journal of …, 2019 - atsjournals.org
Rationale: The contributions of diverse cell populations in the human lung to pulmonary
fibrosis pathogenesis are poorly understood. Single-cell RNA sequencing can reveal …

The emerging roles of interstitial macrophages in pulmonary fibrosis: a perspective from scRNA-seq analyses

Y Gu, T Lawrence, R Mohamed, Y Liang… - Frontiers in …, 2022 - frontiersin.org
Pulmonary fibrosis is an irreversible and progressive disease affecting the lungs, and the
etiology remains poorly understood. This disease can be lethal and currently has no specific …

Integrative analysis of cell state changes in lung fibrosis with peripheral protein biomarkers

CH Mayr, LM Simon, G Leuschner, M Ansari… - EMBO molecular …, 2021 - embopress.org
The correspondence of cell state changes in diseased organs to peripheral protein
signatures is currently unknown. Here, we generated and integrated single‐cell …

Single-cell RNA sequencing reveals profibrotic roles of distinct epithelial and mesenchymal lineages in pulmonary fibrosis

AC Habermann, AJ Gutierrez, LT Bui, SL Yahn… - Science …, 2020 - science.org
Pulmonary fibrosis (PF) is a form of chronic lung disease characterized by pathologic
epithelial remodeling and accumulation of extracellular matrix (ECM). To comprehensively …