PaintOmics is a web server for the integrative analysis and visualisation of multi-omics
datasets using biological pathway maps. PaintOmics 4 has several notable updates that …

The increasing availability of multi-omic platforms poses new challenges to data analysis.
Joint visualization of multi-omics data is instrumental in better understanding …

Background Pathway enrichment techniques are useful for understanding experimental
metabolomics data. Their purpose is to give context to the affected metabolites in terms of …

WikiPathways (wikipathways. org) captures the collective knowledge represented in
biological pathways. By providing a database in a curated, machine readable way, omics …

Pathway-level analysis is a powerful approach enabling interpretation of post-genomic data
at a higher level than that of individual biomolecules. Yet, it is currently hard to integrate …

Motivation: The development of the omics technologies such as transcriptomics, proteomics
and metabolomics has made possible the realization of systems biology studies where …

We present KeyPathwayMinerWeb, the first online platform for de novo pathway enrichment
analysis directly in the browser. Given a biological interaction network (eg protein–protein …

Motivation Biological systems function through dynamic interactions among genes and their
products, regulatory circuits and metabolic networks. Our development of the Pathway Tools …

Covering: up to 2022 With the emergence of large amounts of omics data, computational
approaches for the identification of plant natural product biosynthetic pathways and their …

Covering: up to 2013 Discovering molecular components and their functionality is key to the
development of hypotheses concerning the organization and regulation of metabolic …