LncTarD 2.0: an updated comprehensive database for experimentally-supported functional lncRNA–target regulations in human diseases

H Zhao, X Yin, H Xu, K Liu, W Liu, L Wang… - Nucleic Acids …, 2023 - academic.oup.com
An updated LncTarD 2.0 database provides a comprehensive resource on key lncRNA–
target regulations, their influenced functions and lncRNA-mediated regulatory mechanisms …

LncTarD: A manually-curated database of experimentally-supported functional lncRNA–target regulations in human diseases

H Zhao, J Shi, Y Zhang, A Xie, L Yu… - Nucleic acids …, 2020 - academic.oup.com
Long non-coding RNAs (lncRNAs) are associated with human diseases. Although lncRNA–
disease associations have received significant attention, no online repository is available to …

LncMAP: Pan-cancer atlas of long noncoding RNA-mediated transcriptional network perturbations

Y Li, L Li, Z Wang, T Pan, N Sahni, X Jin… - Nucleic acids …, 2018 - academic.oup.com
Gene regulatory network perturbations contribute to the development and progression of
cancer, however, molecular determinants that mediate transcriptional perturbations remain a …

Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers

S Ning, J Zhang, P Wang, H Zhi, J Wang… - Nucleic acids …, 2016 - academic.oup.com
Abstract Lnc2Cancer (http://www. bio-bigdata. net/lnc2cancer) is a manually curated
database of cancer-associated long non-coding RNAs (lncRNAs) with experimental support …

[HTML][HTML] Identifying and functionally characterizing tissue-specific and ubiquitously expressed human lncRNAs

C Jiang, Y Li, Z Zhao, J Lu, H Chen, N Ding, G Wang… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Recent advances in transcriptome sequencing have made it possible to distinguish
ubiquitously expressed long non-coding RNAs (UE lncRNAs) from tissue-specific lncRNAs …

TRlnc: a comprehensive database for human transcriptional regulatory information of lncRNAs

Y Li, X Li, Y Yang, M Li, F Qian, Z Tang… - Briefings in …, 2021 - academic.oup.com
Long noncoding RNAs (lncRNAs) have been proven to play important roles in
transcriptional processes and biological functions. With the increasing study of human …

AnnoLnc2: the one-stop portal to systematically annotate novel lncRNAs for human and mouse

L Ke, DC Yang, Y Wang, Y Ding… - Nucleic acids research, 2020 - academic.oup.com
With the abundant mammalian lncRNAs identified recently, a comprehensive annotation
resource for these novel lncRNAs is an urgent need. Since its first release in November …

LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data

Q Jiang, R Ma, J Wang, X Wu, S Jin, J Peng, R Tan… - BMC genomics, 2015 - Springer
Background The GENCODE project has collected over 10,000 human long non-coding RNA
(lncRNA) genes. However, the vast majority of them remain to be functionally characterized …

Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function

CR Cabanski, NM White, HX Dang, JM Silva-Fisher… - RNA biology, 2015 - Taylor & Francis
A growing number of gene-centric studies have highlighted the emerging significance of
lncRNAs in cancer. However, these studies primarily focus on a single cancer type …

Cancer LncRNA Census 2 (CLC2): an enhanced resource reveals clinical features of cancer lncRNAs

A Vancura, A Lanzós, N Bosch-Guiteras… - NAR …, 2021 - academic.oup.com
Long non-coding RNAs (lncRNAs) play key roles in cancer and are at the vanguard of
precision therapeutic development. These efforts depend on large and high-confidence …