HIV genome-wide protein associations: a review of 30 years of research

G Li, E De Clercq - Microbiology and Molecular Biology Reviews, 2016 - Am Soc Microbiol
The HIV genome encodes a small number of viral proteins (ie, 16), invariably establishing
cooperative associations among HIV proteins and between HIV and host proteins, to invade …

Short Communication: Cataloguing the HIV Type 1 Human Protein Interaction Network

RG Ptak, W Fu, BE Sanders-Beer… - AIDS research and …, 2008 - liebertpub.com
Although many interactions between HIV-1 and human proteins have been reported in the
scientific literature, no publicly accessible source for efficiently reviewing this information …

Purification and characterization of HIV–human protein complexes

S Jäger, N Gulbahce, P Cimermancic, J Kane, N He… - Methods, 2011 - Elsevier
To fully understand how pathogens infect their host and hijack key biological processes,
systematic mapping of intra-pathogenic and pathogen–host protein–protein interactions …

Global approaches to study protein–protein interactions among viruses and hosts

J Mendez-Rios, P Uetz - Future microbiology, 2010 - Taylor & Francis
While high-throughput protein–protein interaction screens were first published
approximately 10 years ago, systematic attempts to map interactions among viruses and …

Structural similarity-based predictions of protein interactions between HIV-1 and Homo sapiens

JM Doolittle, SM Gomez - Virology journal, 2010 - Springer
Background In the course of infection, viruses such as HIV-1 must enter a cell, travel to sites
where they can hijack host machinery to transcribe their genes and translate their proteins …

Human immunodeficiency virus type 1, human protein interaction database at NCBI

W Fu, BE Sanders-Beer, KS Katz… - Nucleic acids …, 2009 - academic.oup.com
Abstract The 'Human Immunodeficiency Virus Type 1 (HIV-1), Human Protein Interaction
Database', available through the National Library of Medicine at www. ncbi. nlm. nih …

Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks

D van Dijk, G Ertaylan, CAB Boucher, PMA Sloot - BMC systems biology, 2010 - Springer
Abstract Background The National Institute of Allergy and Infectious Diseases has launched
the HIV-1 Human Protein Interaction Database in an effort to catalogue all published …

An integrated map of HIV genome-wide variation from a population perspective

G Li, S Piampongsant, NR Faria, A Voet… - Retrovirology, 2015 - Springer
Background The HIV pandemic is characterized by extensive genetic variability, which has
challenged the development of HIV drugs and vaccines. Although HIV genomes have been …

Patterns of HIV-1 protein interaction identify perturbed host-cellular subsystems

JI MacPherson, JE Dickerson, JW Pinney… - PLoS computational …, 2010 - journals.plos.org
Human immunodeficiency virus type 1 (HIV-1) exploits a diverse array of host cell functions
in order to replicate. This is mediated through a network of virus-host interactions. A variety …

Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs

P Evans, W Dampier, L Ungar, A Tozeren - BMC medical genomics, 2009 - Springer
Background Host protein-protein interaction networks are altered by invading virus proteins,
which create new interactions, and modify or destroy others. The resulting network topology …