Sequential intrahost evolution and onward transmission of SARS-CoV-2 variants

AS Gonzalez-Reiche, H Alshammary… - Nature …, 2023 - nature.com
Persistent severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections have
been reported in immune-compromised individuals and people undergoing immune …

Comparative analysis of SARS‐CoV‐2 Omicron BA. 2.12. 1 and BA. 5.2 variants

CP Ong, ZW Ye, K Tang, R Liang, Y Xie… - Journal of Medical …, 2023 - Wiley Online Library
The initial severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) Omicron
subvariants, BA. 1 and BA. 2, are being progressively displaced by BA. 5 in many countries …

Evolution of the SARS‐CoV‐2 omicron variants BA. 1 to BA. 5: implications for immune escape and transmission

LB Shrestha, C Foster, W Rawlinson… - Reviews in Medical …, 2022 - Wiley Online Library
The first dominant SARS‐CoV‐2 Omicron variant BA. 1 harbours 35 mutations in its Spike
protein from the original SARS‐CoV‐2 variant that emerged late 2019. Soon after its …

SARS-CoV-2 Spike protein variant D614G increases infectivity and retains sensitivity to antibodies that target the receptor binding domain

L Yurkovetskiy, KE Pascal, C Tomkins-Tinch, T Nyalile… - BioRxiv, 2020 - biorxiv.org
Virus genome sequence variants that appear over the course of an outbreak can be
exploited to map the trajectory of the virus from one susceptible host to another. While such …

SARS-CoV-2 shedding and evolution in patients who were immunocompromised during the omicron period: a multicentre, prospective analysis

Z Raglow, D Surie, JD Chappell, Y Zhu… - The Lancet …, 2024 - thelancet.com
Summary Background Prolonged SARS-CoV-2 infections in people who are
immunocompromised might predict or source the emergence of highly mutated variants. The …

[HTML][HTML] Emerging SARS-CoV-2 variants: Why, how, and what's next?

Y Chen, Q Liu, L Zhou, Y Zhou, H Yan, K Lan - Cell Insight, 2022 - Elsevier
The emergence of the SARS-CoV-2 Omicron variant poses a striking threat to human
society. More than 30 mutations in the Spike protein of the Omicron variant severely …

A novel and expanding SARS-CoV-2 variant, B. 1.526, identified in New York

MK Annavajhala, H Mohri, P Wang, M Nair, JE Zucker… - MedRxiv, 2021 - medrxiv.org
Recent months have seen surges of SARS-CoV-2 infection across the globe along with
considerable viral evolution. Extensive mutations in the spike protein of variants B. 1.1. 7 …

Evolving spike mutations in SARS-CoV-2 Omicron variants facilitate evasion from breakthrough infection-acquired antibodies

S Chen, Z Huang, Y Guo, H Guo, L Jian, J Xiao, X Yao… - Cell Discovery, 2023 - nature.com
Dear Editor, SARS-CoV-2 inevitably evolves toward being more robust at multiplying. In the
herd immunity era, mutations allowing SARS-CoV-2 to bypass the immunity acquired from …

SARS-CoV-2 variant evolution in the United States: High accumulation of viral mutations over time likely through serial Founder Events and mutational bursts

RN Tasakis, G Samaras, A Jamison, M Lee, A Paulus… - PLoS …, 2021 - journals.plos.org
Since the first case of COVID-19 in December 2019 in Wuhan, China, SARS-CoV-2 has
spread worldwide and within a year and a half has caused 3.56 million deaths globally. With …

SARS-CoV-2 evolution from the BA. 2.86 to JN. 1 variants: unexpected consequences

X Wang, L Lu, S Jiang - Trends in Immunology, 2024 - cell.com
SARS-CoV-2 is continuously evolving. The Omicron subvariant BA. 2.86, with> 30 mutations
in its spike (S) protein compared with its predecessor strain BA. 2, was expected to quickly …