An integrated map of HIV genome-wide variation from a population perspective

G Li, S Piampongsant, NR Faria, A Voet… - Retrovirology, 2015 - Springer
Background The HIV pandemic is characterized by extensive genetic variability, which has
challenged the development of HIV drugs and vaccines. Although HIV genomes have been …

Global HIV-1 diversity surveillance

C Aldrich, J Hemelaar - Trends in molecular medicine, 2012 - cell.com
The global distribution of HIV-1 subtypes and recombinants is extremely complex and
dynamic. The increasing diversity has profound implications for many aspects of the …

Global and regional molecular epidemiology of HIV-1, 1990–2015: a systematic review, global survey, and trend analysis

J Hemelaar, R Elangovan, J Yun… - The Lancet infectious …, 2019 - thelancet.com
Background Global genetic diversity of HIV-1 is a major challenge to the development of HIV
vaccines. We aimed to estimate the regional and global distribution of HIV-1 subtypes and …

Country level diversity of the HIV-1 pandemic between 1990 and 2015

J Hemelaar, S Loganathan, R Elangovan… - Journal of …, 2020 - Am Soc Microbiol
The global diversity of HIV forms a major challenge to the development of an HIV vaccine, as
well as diagnostic, drug resistance, and viral load assays, which are essential to reaching …

Characterization of partial and near full-length genomes of HIV-1 strains sampled from recently infected individuals in Sao Paulo, Brazil

SS Sanabani, ÉRS Pastena, AC da Costa… - PloS one, 2011 - journals.plos.org
Background Genetic variability is a major feature of human immunodeficiency virus type 1
(HIV-1) and is considered the key factor frustrating efforts to halt the HIV epidemic. A proper …

Geographic and Population Distributions of Human Immunodeficiency Virus (HIV)–1 and HIV-2 Circulating Subtypes: A Systematic Literature Review and Meta …

A Williams, S Menon, M Crowe… - The Journal of …, 2023 - academic.oup.com
Background HIV poses significant challenges for vaccine development due to its high
genetic mutation and recombination rates. Understanding the distribution of HIV subtypes …

Sensitive next-generation sequencing method reveals deep genetic diversity of HIV-1 in the Democratic Republic of the Congo

MA Rodgers, E Wilkinson, A Vallari, C McArthur… - Journal of …, 2017 - Am Soc Microbiol
As the epidemiological epicenter of the human immunodeficiency virus (HIV) pandemic, the
Democratic Republic of the Congo (DRC) is a reservoir of circulating HIV strains exhibiting …

A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control

I Bartha, JM Carlson, CJ Brumme, PJ McLaren… - elife, 2013 - elifesciences.org
HIV-1 sequence diversity is affected by selection pressures arising from host genomic
factors. Using paired human and viral data from 1071 individuals, we ran> 3000 genome …

HIV genetic diversity: biological and public health consequences

IF Butler, I Pandrea, PA Marx, C Apetrei - Current HIV research, 2007 - ingentaconnect.com
The devastating consequences of AIDS pandemic will probably only be controlled when a
vaccine is developed that is safe, effective, affordable, and simple enough to permit …

Molecular epidemiology of HIV-1 in African countries: a comprehensive overview

M Giovanetti, M Ciccozzi, C Parolin, A Borsetti - Pathogens, 2020 - mdpi.com
The human immunodeficiency virus type 1 (HIV-1) originated in non-human primates in
West-central Africa and continues to be a major global public health issue, having claimed …