Dynamic proteomic and phosphoproteomic atlas of corticostriatal axons in neurodevelopment

V Dumrongprechachan, RB Salisbury, L Butler… - Elife, 2022 - elifesciences.org
Mammalian axonal development begins in embryonic stages and continues postnatally.
After birth, axonal proteomic landscape changes rapidly, coordinated by transcription …

Cell-type and subcellular compartment-specific APEX2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum

V Dumrongprechachan, RB Salisbury, G Soto… - Nature …, 2021 - nature.com
The vertebrate brain consists of diverse neuronal types, classified by distinct anatomy and
function, along with divergent transcriptomes and proteomes. Defining the cell-type specific …

Subcellular proteomics of dopamine neurons in the mouse brain

BD Hobson, SJ Choi, EV Mosharov, RK Soni, D Sulzer… - Elife, 2022 - elifesciences.org
Dopaminergic neurons modulate neural circuits and behaviors via dopamine (DA) release
from expansive, long range axonal projections. The elaborate cytoarchitecture of these …

Combining Comparative Proteomics and Molecular Genetics Uncovers Regulators of Synaptic and Axonal Stability and Degeneration In Vivo

TM Wishart, TM Rooney, DJ Lamont, AK Wright… - 2012 - journals.plos.org
Degeneration of synaptic and axonal compartments of neurons is an early event contributing
to the pathogenesis of many neurodegenerative diseases, but the underlying molecular …

[HTML][HTML] Functional genomics of axons and synapses to understand neurodegenerative diseases

A Di Paolo, J Garat, G Eastman, J Farias… - Frontiers in Cellular …, 2021 - frontiersin.org
Functional genomics studies through transcriptomics, translatomics and proteomics have
become increasingly important tools to understand the molecular basis of biological systems …

Temporal proteomic profiling of postnatal human cortical development

MS Breen, S Ozcan, JM Ramsey, Z Wang… - Translational …, 2018 - nature.com
Healthy cortical development depends on precise regulation of transcription and translation.
However, the dynamics of how proteins are expressed, function and interact across …

A multiregional proteomic survey of the postnatal human brain

BC Carlyle, RR Kitchen, JE Kanyo, EZ Voss… - Nature …, 2017 - nature.com
Detailed observations of transcriptional, translational and post-translational events in the
human brain are essential to improving our understanding of its development, function and …

The axonal endoplasmic reticulum: one organelle—many functions in development, maintenance, and plasticity

A Luarte, VH Cornejo, F Bertin… - Developmental …, 2018 - Wiley Online Library
The endoplasmic reticulum (ER) is highly conserved in eukaryotes and neurons. Indeed, the
localization of the organelle in axons has been known for nearly half a century. However, the …

Phosphoproteomic and bioinformatic methods for analyzing signaling in vertebrate axon growth and regeneration

M Igarashi, A Kawasaki, Y Ishikawa, A Honda… - Journal of Neuroscience …, 2020 - Elsevier
Phosphorylation is the most important post-translational modification of proteins in many
cells, including neurons. Phosphoproteomics is a relatively new technique for …

Decoding neuroproteomics: integrating the genome, translatome and functional anatomy

RR Kitchen, JS Rozowsky, MB Gerstein… - Nature neuroscience, 2014 - nature.com
The immense intercellular and intracellular heterogeneity of the CNS presents major
challenges for high-throughput omic analyses. Transcriptional, translational and post …