ZOVER: the database of zoonotic and vector-borne viruses

S Zhou, B Liu, Y Han, Y Wang, L Chen… - Nucleic Acids …, 2022 - academic.oup.com
Emerging infectious diseases significantly threaten global public health and socioeconomic
security. The majority of emerging infectious disease outbreaks are caused by …

DRodVir: A resource for exploring the virome diversity in rodents

L Chen, B Liu, Z Wu, Q Jin, J Yang - Journal of Genetics and Genomics, 2017 - Elsevier
Emerging zoonotic diseases have received tremendous interests in recent years, as they
pose a significant threat to human health, animal welfare, and economic stability. A high …

[HTML][HTML] Beyond cells–The virome in the human holobiont

R García-López, V Pérez-Brocal, A Moya - Microbial Cell, 2019 - ncbi.nlm.nih.gov
Viromics, or viral metagenomics, is a relatively new and burgeoning field of research that
studies the complete collection of viruses forming part of the microbiota in any given niche. It …

The Global Virome in One Network (VIRION): an atlas of vertebrate-virus associations

CJ Carlson, RJ Gibb, GF Albery, L Brierley, RP Connor… - MBio, 2022 - Am Soc Microbiol
Data that catalogue viral diversity on Earth have been fragmented across sources,
disciplines, formats, and various degrees of open sharing, posing challenges for research …

Unraveling the viral dark matter through viral metagenomics

TM Santiago-Rodriguez, EB Hollister - Frontiers in immunology, 2022 - frontiersin.org
Viruses are part of the microbiome and have essential roles in immunology, evolution,
biogeochemical cycles, health, and disease progression. Viruses influence a wide variety of …

[HTML][HTML] Focus: Microbiome: An Ecological Framework of the Human Virome Provides Classification of Current Knowledge and Identifies Areas of Forthcoming …

MT Parker - The Yale Journal of Biology and Medicine, 2016 - ncbi.nlm.nih.gov
Recent advances in sequencing technologies have opened the door for the classification of
the human virome. While taxonomic classification can be applied to the viruses identified in …

[HTML][HTML] Predicting zoonotic potential of viruses: where are we?

N Mollentze, DG Streicker - Current Opinion in Virology, 2023 - Elsevier
Highlights•Models predict zoonotic risk using viral traits, host range or genome
composition.•Input data availability defines prospects for zoonosis prediction before …

virMine: automated detection of viral sequences from complex metagenomic samples

A Garretto, T Hatzopoulos, C Putonti - PeerJ, 2019 - peerj.com
Metagenomics has enabled sequencing of viral communities from a myriad of different
environments. Viral metagenomic studies routinely uncover sequences with no recognizable …

Data proliferation, reconciliation, and synthesis in viral ecology

R Gibb, GF Albery, DJ Becker, L Brierley, R Connor… - Bioscience, 2021 - academic.oup.com
The fields of viral ecology and evolution are rapidly expanding, motivated in part by
concerns around emerging zoonoses. One consequence is the proliferation of host–virus …

[HTML][HTML] Virus taxonomy

JH Kuhn - Encyclopedia of virology, 2021 - ncbi.nlm.nih.gov
Virus taxonomy is the classification of viruses into categories called taxa and the
development and implementation of a standardized nomenclature for taxa. Whereas virus …