Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells

Y Xin, J Kim, M Ni, Y Wei, H Okamoto… - Proceedings of the …, 2016 - National Acad Sciences
This study provides an assessment of the Fluidigm C1 platform for RNA sequencing of
single mouse pancreatic islet cells. The system combines microfluidic technology and …

[HTML][HTML] An Integrated Map of Cell Type–Specific Gene Expression in Pancreatic Islets

RM Elgamal, P Kudtarkar, RL Melton, HM Mummey… - Diabetes, 2023 - Am Diabetes Assoc
Pancreatic islets consist of multiple cell types that produce hormones required for glucose
homeostasis, and islet dysfunction is a major factor in type 1 and type 2 diabetes. Numerous …

The use of the Fluidigm C1 for RNA expression analyses of single cells

DM DeLaughter - Current protocols in molecular biology, 2018 - Wiley Online Library
Understanding the transcriptional heterogeneity that occurs on the level of a single cell is
critical to understanding the gene‐regulatory mechanisms underlying development and …

Single-nucleus RNA sequencing of human pancreatic islets identifies novel gene sets and distinguishes β-cell subpopulations with dynamic transcriptome profiles

RB Kang, Y Li, C Rosselot, T Zhang, M Siddiq… - Genome Medicine, 2023 - Springer
Background Single-cell RNA sequencing (scRNA-seq) provides valuable insights into
human islet cell types and their corresponding stable gene expression profiles. However …

Massively parallel nanowell-based single-cell gene expression profiling

LD Goldstein, YJJ Chen, J Dunne, A Mir, H Hubschle… - BMC genomics, 2017 - Springer
Background Technological advances have enabled transcriptome characterization of cell
types at the single-cell level providing new biological insights. New methods that enable …

Using single-nucleus RNA-sequencing to interrogate transcriptomic profiles of archived human pancreatic islets

G Basile, S Kahraman, E Dirice, H Pan, JM Dreyfuss… - Genome medicine, 2021 - Springer
Background Human pancreatic islets are a central focus of research in metabolic studies.
Transcriptomics is frequently used to interrogate alterations in cultured human islet cells …

[HTML][HTML] Integrated human pseudoislet system and microfluidic platform demonstrate differences in GPCR signaling in islet cells

JT Walker, R Haliyur, HA Nelson, M Ishahak… - JCI insight, 2020 - ncbi.nlm.nih.gov
Pancreatic islets secrete insulin from β cells and glucagon from α cells, and dysregulated
secretion of these hormones is a central component of diabetes. Thus, an improved …

[HTML][HTML] Single-cell RNA-seq of the pancreatic islets––a promise not yet fulfilled?

YJ Wang, KH Kaestner - Cell metabolism, 2019 - cell.com
In the past 3 years, we have seen a flurry of publications on single-cell RNA sequencing
(RNA-seq) analyses of pancreatic islets from mouse and human. This technology holds the …

[HTML][HTML] RNA sequencing of single human islet cells reveals type 2 diabetes genes

Y Xin, J Kim, H Okamoto, M Ni, Y Wei, C Adler… - Cell metabolism, 2016 - cell.com
Pancreatic islet cells are critical for maintaining normal blood glucose levels, and their
malfunction underlies diabetes development and progression. We used single-cell RNA …

A single-cell transcriptome atlas of the human pancreas

MJ Muraro, G Dharmadhikari, D Grün, N Groen… - Cell systems, 2016 - cell.com
To understand organ function, it is important to have an inventory of its cell types and of their
corresponding marker genes. This is a particularly challenging task for human tissues like …