Uncovering protein networks in cardiovascular proteomics

M Hasman, M Mayr, K Theofilatos - Molecular & Cellular Proteomics, 2023 - ASBMB
Biological networks have been widely used in many different diseases to identify potential
biomarkers and design drug targets. In the present review, we describe the main …

Molecular networks in Network Medicine: Development and applications

EK Silverman, HHHW Schmidt… - … Systems Biology and …, 2020 - Wiley Online Library
Network Medicine applies network science approaches to investigate disease
pathogenesis. Many different analytical methods have been used to infer relevant molecular …

Protein co-expression network analysis (ProCoNA)

DL Gibbs, A Baratt, RS Baric, Y Kawaoka… - Journal of clinical …, 2013 - Springer
Background Biological networks are important for elucidating disease etiology due to their
ability to model complex high dimensional data and biological systems. Proteomics provides …

Proteomics: from single molecules to biological pathways

SR Langley, J Dwyer, I Drozdov, X Yin… - Cardiovascular …, 2013 - academic.oup.com
The conventional reductionist approach to cardiovascular research investigates individual
candidate factors or linear signalling pathways but ignores more complex interactions in …

Network integration and graph analysis in mammalian molecular systems biology

A Ma'ayan - IET systems biology, 2008 - IET
Abstraction of intracellular biomolecular interactions into networks is useful for data
integration and graph analysis. Network analysis tools facilitate predictions of novel …

Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Multi-organ whole-genome measurements and reverse engineering …

J Tegnér, J Skogsberg, J Björkegren - Journal of lipid research, 2007 - ASBMB
Together with computational analysis and modeling, the development of whole-genome
measurement technologies holds the potential to fundamentally change research on …

How advancement in biological network analysis methods empowers proteomics

WWB Goh, YH Lee, M Chung, L Wong - Proteomics, 2012 - Wiley Online Library
Proteomics provides important information‐that may not be inferable from indirect sources
such as RNA or DNA‐on key players in biological systems or disease states. However, it …

Systems biology in cardiovascular disease: a multiomics approach

A Joshi, M Rienks, K Theofilatos, M Mayr - Nature Reviews Cardiology, 2021 - nature.com
Omics techniques generate large, multidimensional data that are amenable to analysis by
new informatics approaches alongside conventional statistical methods. Systems theories …

Strengths and opportunities of network medicine in cardiovascular diseases

G Benincasa, R Marfella, N Della Mura… - Circulation …, 2020 - jstage.jst.go.jp
Network medicine can advance current medical practice by arising as response to the
limitations of a reductionist approach focusing on cardiovascular (CV) diseases as a direct …

[HTML][HTML] Review of biological network data and its applications

D Yu, MS Kim, G Xiao, TH Hwang - Genomics & informatics, 2013 - ncbi.nlm.nih.gov
Studying biological networks, such as protein-protein interactions, is key to understanding
complex biological activities. Various types of large-scale biological datasets have been …