Genome-wide identification of regulatory sequences undergoing accelerated evolution in the human genome

X Dong, X Wang, F Zhang, W Tian - Molecular Biology and …, 2016 - academic.oup.com
Accelerated evolution of regulatory sequence can alter the expression pattern of target
genes, and cause phenotypic changes. In this study, we used DNase I hypersensitive sites …

Comprehensive identification and analysis of human accelerated regulatory DNA

RM Gittelman, E Hun, F Ay, J Madeoy… - Genome …, 2015 - genome.cshlp.org
It has long been hypothesized that changes in gene regulation have played an important
role in human evolution, but regulatory DNA has been much more difficult to study compared …

The Developmental Brain Gene NPAS3 Contains the Largest Number of Accelerated Regulatory Sequences in the Human Genome

GB Kamm, F Pisciottano, R Kliger… - Molecular biology and …, 2013 - academic.oup.com
To identify the evolutionary genetic novelties that contributed to shape human-specific traits
such as the use of a complex language, long-term planning and exceptional learning …

Developmental loci harbor clusters of accelerated regions that evolved independently in ape lineages

D Kostka, AK Holloway… - Molecular biology and …, 2018 - academic.oup.com
Some of the fastest evolving regions of the human genome are conserved noncoding
elements with many human-specific DNA substitutions. These human accelerated regions …

Enhancer function and evolutionary roles of human accelerated regions

S Whalen, KS Pollard - Annual review of genetics, 2022 - annualreviews.org
Human accelerated regions (HARs) are the fastest-evolving sequences in the human
genome. When HARs were discovered in 2006, their function was mysterious due to scant …

Human evolution: the non-coding revolution

LF Franchini, KS Pollard - BMC biology, 2017 - Springer
What made us human? Gene expression changes clearly played a significant part in human
evolution, but pinpointing the causal regulatory mutations is hard. Comparative genomics …

Homo sapiens-Specific Binding Site Variants within Brain Exclusive Enhancers Are Subject to Accelerated Divergence across Human Population

R Zehra, AA Abbasi - Genome biology and evolution, 2018 - academic.oup.com
Empirical assessments of human accelerated noncoding DNA frgaments have delineated
presence of many cis-regulatory elements. Enhancers make up an important category of …

[PDF][PDF] Massively parallel dissection of human accelerated regions in human and chimpanzee neural progenitors

H Ryu, F Inoue, S Whalen, A Williams, M Kircher… - BioRxiv, 2018 - researchgate.net
How mutations in gene regulatory elements lead to evolutionary changes remains largely
unknown. Human accelerated regions (HARs) are ideal for exploring this question, because …

Human accelerated genome regions with value in medical genetics and drug discovery

XY Chu, Y Quan, HY Zhang - Drug Discovery Today, 2020 - Elsevier
Highlights•Evolutionary insights are helpful in various medical fields.•HARs are significantly
enriched with neurological disorder-associated genes.•Approved drugs target nearly twice …

Functional conservation of sequence determinants at rapidly evolving regulatory regions across mammals

I Huh, I Mendizabal, T Park, SV Yi - PLoS Computational Biology, 2018 - journals.plos.org
Recent advances in epigenomics have made it possible to map genome-wide regulatory
regions using empirical methods. Subsequent comparative epigenomic studies have …