Methods for Functional Characterization of Genetic Polymorphisms of Non-Coding Regulatory Regions of the Human Genome

AN Uvarova, EA Tkachenko, EM Stasevich… - Biochemistry …, 2024 - Springer
Currently, numerous associations between genetic polymorphisms and various diseases
have been characterized through the Genome-Wide Association Studies. Majority of the …

[HTML][HTML] Human-genome single nucleotide polymorphisms affecting transcription factor binding and their role in pathogenesis

EV Antontseva, AO Degtyareva… - Vavilov Journal of …, 2023 - ncbi.nlm.nih.gov
Single nucleotide polymorphisms (SNPs) are the most common type of variation in the
human genome. The vast majority of SNPs identified in the human genome do not have any …

[HTML][HTML] Disease-associated genetic variants in the regulatory regions of human genes: mechanisms of action on transcription and genomic resources for dissecting …

EV Ignatieva, EA Matrosova - Vavilov Journal of Genetics and …, 2021 - ncbi.nlm.nih.gov
Whole genome and whole exome sequencing technologies play a very important role in the
studies of the genetic aspects of the pathogenesis of various diseases. The ample use of …

Relative efficiency of transcription factor binding to allelic variants of regulatory regions of human genes in immunoprecipitation and real-time PCR

NA Mitkin, KV Korneev, AM Gorbacheva, DV Kuprash - Molecular Biology, 2019 - Springer
The efficiency at which specific transcription factors interact with DNA may vary in the
presence of single nucleotide polymorphisms (SNPs), and the variation provides an …

How to find genomic regions relevant for gene regulation

X Guo, U Ohler, F Yildirim - Medizinische Genetik, 2021 - degruyter.com
Genetic variants associated with human diseases are often located outside the protein
coding regions of the genome. Identification and functional characterization of the regulatory …

Identification of Functional cis‐regulatory Polymorphisms in the Human Genome

I Molineris, D Schiavone, F Rosa, G Matullo… - Human …, 2013 - Wiley Online Library
Polymorphisms in regulatory DNA regions are believed to play an important role in
determining phenotype, including disease, and in providing raw material for evolution. We …

Potential regulatory SNPs in promoters of human genes: a systematic approach

M Stepanova, T Tiazhelova, M Skoblov… - Molecular and cellular …, 2006 - Elsevier
Single nucleotide polymorphisms (SNPs) can significantly contribute to the cellular level of
the mRNA transcripts encoded by human disease related genes. DNA variations between …

Program complex SNP-MED for analysis of single-nucleotide polymorphism (SNP) effects on the function of genes associated with socially significant diseases

NL Podkolodnyy, DA Afonnikov, YY Vaskin… - Russian Journal of …, 2014 - Springer
We describe development and application of the new SNP-MED modular software system,
designed to examine the influence of single-nucleotide polymorphisms (SNPs) on the …

Medical genetics, genomics and bioinformatics aid in understanding molecular mechanisms of human diseases

YL Orlov, AA Anashkina, VV Klimontov… - International Journal of …, 2021 - mdpi.com
Molecular mechanisms of human disease progression often have complex genetic
underpinnings, and sophisticated sequencing approaches coupled with advanced analytics …

Prediction of nonsynonymous single nucleotide polymorphisms in human disease-associated genes

S Sunyaev, J Hanke, A Aydin, U Wirkner… - Journal of molecular …, 1999 - Springer
Abstract Analysis of human genetic variation can shed light on the problem of the genetic
basis of complex disorders. Nonsynonymous single nucleotide polymorphisms (SNPs) …