[HTML][HTML] Tumor functional heterogeneity unraveled by scRNA-seq technologies

L González-Silva, L Quevedo, I Varela - Trends in cancer, 2020 - cell.com
Effective cancer treatment has been precluded by the presence of various forms of
intratumoral complexity that drive treatment resistance and metastasis. Recent single-cell …

[HTML][HTML] Single-cell transcriptomic analysis of tumor heterogeneity

HM Levitin, J Yuan, PA Sims - Trends in cancer, 2018 - cell.com
Intratumoral heterogeneity is among the greatest challenges in precision cancer therapy.
However, developments in high-throughput single-cell RNA sequencing (scRNA-seq) may …

[HTML][HTML] Advances in single-cell RNA sequencing and its applications in cancer research

D Huang, N Ma, X Li, Y Gou, Y Duan, B Liu… - Journal of hematology & …, 2023 - Springer
Cancers are a group of heterogeneous diseases characterized by the acquisition of
functional capabilities during the transition from a normal to a neoplastic state. Powerful …

CancerSCEM: a database of single-cell expression map across various human cancers

J Zeng, Y Zhang, Y Shang, J Mai, S Shi… - Nucleic acids …, 2022 - academic.oup.com
With the proliferating studies of human cancers by single-cell RNA sequencing technique
(scRNA-seq), cellular heterogeneity, immune landscape and pathogenesis within diverse …

[HTML][HTML] Multiplexed single-cell transcriptional response profiling to define cancer vulnerabilities and therapeutic mechanism of action

JM McFarland, BR Paolella, A Warren… - Nature …, 2020 - nature.com
Assays to study cancer cell responses to pharmacologic or genetic perturbations are
typically restricted to using simple phenotypic readouts such as proliferation rate. Information …

Deciphering functional tumor states at single‐cell resolution

R Vegliante, I Pastushenko, C Blanpain - The EMBO Journal, 2022 - embopress.org
Within a tumor, cancer cells exist in different states that are associated with distinct tumor
functions, including proliferation, differentiation, invasion, metastasis, and resistance to anti …

[HTML][HTML] Single-cell transcriptomics bioinformatics and computational challenges

OB Poirion, X Zhu, T Ching, L Garmire - Frontiers in genetics, 2016 - frontiersin.org
The emerging single-cell RNA-Seq (scRNA-Seq) technology holds the promise to
revolutionize our understanding of diseases and associated biological processes at an …

Characterization of cancer genomic heterogeneity by next-generation sequencing advances precision medicine in cancer treatment

J Zhang, SS Späth, SL Marjani… - Precision clinical …, 2018 - academic.oup.com
Cancer is a heterogeneous disease with unique genomic and phenotypic features that differ
between individual patients and even among individual tumor regions. In recent years, large …

[HTML][HTML] Single-cell RNA sequencing in cancer: Applications, advances, and emerging challenges

G Sun, Z Li, D Rong, H Zhang, X Shi, W Yang… - Molecular Therapy …, 2021 - cell.com
Cancer has become one of the greatest threats to human health, and new technologies are
urgently needed to further clarify the mechanisms of cancer so that better detection and …

[HTML][HTML] Deconvolution of cell type-specific drug responses in human tumor tissue with single-cell RNA-seq

W Zhao, A Dovas, EF Spinazzi, HM Levitin, MA Banu… - Genome medicine, 2021 - Springer
Background Preclinical studies require models that recapitulate the cellular diversity of
human tumors and provide insight into the drug sensitivities of specific cellular populations …