Molecular dynamics simulation in drug discovery: opportunities and challenges

R Shukla, T Tripathi - Innovations and implementations of computer aided …, 2021 - Springer
Drug discovery is the process used to discover new candidate medications. In the past, most
drugs were discovered by identification of active-ingredients or by serendipity. Modern drug …

From byte to bench to bedside: molecular dynamics simulations and drug discovery

M Ahmed, AM Maldonado, JD Durrant - BMC biology, 2023 - Springer
Molecular dynamics (MD) simulations and computer-aided drug design (CADD) have
advanced substantially over the past two decades, thanks to continuous computer hardware …

Applications of molecular dynamics simulations in drug discovery

S AlRawashdeh, KH Barakat - Computational Drug Discovery and Design, 2023 - Springer
In the current drug development process, molecular dynamics (MD) simulations have proven
to be very useful. This chapter provides an overview of the current applications of MD …

Use of molecular dynamics simulations in structure-based drug discovery

I Bera, PV Payghan - Current pharmaceutical design, 2019 - ingentaconnect.com
Background: Traditional drug discovery is a lengthy process which involves a huge amount
of resources. Modern-day drug discovers various multidisciplinary approaches amongst …

Molecular dynamics as a tool in rational drug design: current status and some major applications

R Galeazzi - Current Computer-Aided Drug Design, 2009 - ingentaconnect.com
Rational Drug Design has become a well-established discipline in pharmaceutical research.
It uses computational chemistry with the aim to discover or study drugs and their related …

Identification of drug binding sites and action mechanisms with molecular dynamics simulations

Y Wang, CS Lupala, H Liu, X Lin - Current Topics in Medicinal …, 2018 - ingentaconnect.com
Identifying drug binding sites and elucidating drug action mechanisms are important
components in a drug discovery process. In this review, we briefly compared three different …

The future of molecular dynamics simulations in drug discovery

DW Borhani, DE Shaw - Journal of computer-aided molecular design, 2012 - Springer
Molecular dynamics simulations can now track rapid processes—those occurring in less
than about a millisecond—at atomic resolution for many biologically relevant systems. These …

Molecular dynamics simulations and novel drug discovery

X Liu, D Shi, S Zhou, H Liu, H Liu… - Expert opinion on drug …, 2018 - Taylor & Francis
Introduction: Molecular dynamics (MD) simulations can provide not only plentiful dynamical
structural information on biomacromolecules but also a wealth of energetic information …

[HTML][HTML] Molecular modeling in drug discovery

TI Adelusi, AQK Oyedele, ID Boyenle… - Informatics in Medicine …, 2022 - Elsevier
With the financial requirements and high time associated with bringing a commercial drug to
the market, the application of computer-aided drug design has been recognized as a …

Molecular dynamics-driven drug discovery: leaping forward with confidence

A Ganesan, ML Coote, K Barakat - Drug discovery today, 2017 - Elsevier
Highlights•Currently, developing a market-approved drug costs a staggering $2.6 billion.•In
silico methods have become an important strategy for narrowing down on promising lead …