Spatially resolved transcriptomics (SRT) technologies have revolutionized the study of tissue organization. We introduce a graph convolutional network with an attention and positive …
Metric multidimensional scaling is one of the classical methods for embedding data into low- dimensional Euclidean space. It creates the low-dimensional embedding by approximately …
Identifying cell types and states remains a time-consuming and error-prone challenge for spatial biology. While deep learning is increasingly used, it is difficult to generalize due to …
S Huang, L Ouyang, J Tang, K Qian, X Chen, Z Xu… - Clinical Cancer …, 2024 - Springer
Tumor research is a fundamental focus of medical science, yet the intrinsic heterogeneity and complexity of tumors present challenges in understanding their biological mechanisms …
Identifying cell types and states remains a time-consuming, error-prone challenge for spatial biology. While deep learning is increasingly used, it is difficult to generalize due to variability …
In an era where transcriptomics-based subtyping, phenotyping and mechanistic understanding is increasingly being driven by state-of-the-art spatially resolved …
W Min, D Fang, J Chen, S Zhang - bioRxiv, 2024 - biorxiv.org
Recent advances in spatial transcriptomics (ST) technology allow researchers to comprehensively measure gene expression patterns at the level of individual cells or even …
K Xu, Y Xu, Z Wang, X Zhou, L Zhang - bioRxiv, 2024 - biorxiv.org
Spatial transcriptomics data provide insights into gene expression patterns within tissue contexts, where identifying spatial domains with similar gene expression is crucial …