NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signatures

D Martínez-Enguita, SK Dwivedi… - Briefings in …, 2023 - academic.oup.com
Precision medicine relies on the identification of robust disease and risk factor signatures
from omics data. However, current knowledge-driven approaches may overlook novel or …

Effects of DNA methylation and its application in inflammatory bowel disease

FA Akanyibah, Y Zhu, A Wan… - International …, 2024 - spandidos-publications.com
Inflammatory bowel disease (IBD) is marked by persistent inflammation, and its development
and progression are linked to environmental, genetic, immune system and gut microbial …

[HTML][HTML] Tracing toxic path of antimony: From bioaccumulation to DNA hypomethylation in zebrafish (Danio rerio)

J Zhang, A Yang, W Cui, J Zhang, A Niu, X Hu… - … and Environmental Safety, 2024 - Elsevier
The increasing concentration of Antimony (Sb) in ecological environments has raised
serious concerns about its potential biotoxicological impact. This study investigated the …

Age Prediction Using DNA Methylation Heterogeneity Metrics

DI Karetnikov, SE Romanov, VP Baklaushev… - International Journal of …, 2024 - mdpi.com
Dynamic changes in genomic DNA methylation patterns govern the epigenetic
developmental programs and accompany the organism's aging. Epigenetic clock (eAge) …

Original Research Article A meta-study on optimizing healthcare performance with artificial intelligence and machine learning

B Lainjo - Journal of Autonomous Intelligence, 2024 - jai.front-sci.com
This study explores the transformative impact of Artificial Intelligence (AI) and Machine
Learning (ML) in healthcare, focusing on enhancing patient care through operational …

MTHFR epigenetic derepression protects against diabetes cardiac fibrosis

H Sun, K Song, Y Zhou, JF Ding, B Tu, JJ Yang… - Free Radical Biology …, 2022 - Elsevier
Background Diabetes cardiac fibrosis is associated with altered DNA methylation of
fibrogenic genes; however, the underlying mechanisms remain unclear. Objectives In this …

Quantifying stochasticity in the aging DNA methylome

CG Bell - Nature Aging, 2024 - nature.com
Aging-related DNA methylation changes are numerous. Their precise measurement has
opened new avenues to explore aging-related disease pathology, including the construction …

Identification of novel prognostic biomarkers in the TF-enhancer-target regulatory network in hepatocellular carcinoma and immune infiltration analysis

J Yan, G Ye, Y Shao, H Zhou - Frontiers in Genetics, 2023 - frontiersin.org
Background: Hepatocellular carcinoma (HCC) remains notorious for its high malignancy,
poor prognosis and high mortality. The exploration of novel therapeutic agents for HCC has …

Group-shrinkage feature selection with a spatial network for mining DNA methylation data

X Tang, Z Mo, C Chang, X Qian - Computers in Biology and Medicine, 2023 - Elsevier
Identifying disease-related biomarkers from high-dimensional DNA methylation data helps
in reducing early screening costs and inferring pathogenesis mechanisms. Good discovery …

Epigenomic reprogramming in iAs-mediated carcinogenesis

S George, RN Cassidy, WN Saintilnord… - Advances in …, 2023 - Elsevier
Arsenic is a naturally occurring metal carcinogen found in the Earth's crust. Millions of
people worldwide are chronically exposed to arsenic through drinking water and food …