Roles of transposable elements in the regulation of mammalian transcription

R Fueyo, J Judd, C Feschotte, J Wysocka - Nature reviews Molecular …, 2022 - nature.com
Transposable elements (TEs) comprise about half of the mammalian genome. TEs often
contain sequences capable of recruiting the host transcription machinery, which they use to …

Transposable elements shape the evolution of mammalian development

AD Senft, TS Macfarlan - Nature Reviews Genetics, 2021 - nature.com
Transposable elements (TEs) promote genetic innovation but also threaten genome stability.
Despite multiple layers of host defence, TEs actively shape mammalian-specific …

Taming transposable elements in vertebrates: from epigenetic silencing to domestication

MV Almeida, G Vernaz, ALK Putman, EA Miska - Trends in genetics, 2022 - cell.com
Transposable element (TE)-derived sequences are ubiquitous in most eukaryotic genomes
known to date. Because their expression and mobility can lead to genomic instability …

Mammalian genome innovation through transposon domestication

AJ Modzelewski, J Gan Chong, T Wang, L He - Nature cell biology, 2022 - nature.com
Since the discovery of transposons, their sheer abundance in host genomes has puzzled
many. While historically viewed as largely harmless 'parasitic'DNAs during evolution …

The epigenetic control of the transposable element life cycle in plant genomes and beyond

P Liu, D Cuerda-Gil, S Shahid… - Annual Review of …, 2022 - annualreviews.org
Within the life cycle of a living organism, another life cycle exists for the selfish genome
inhabitants, which are called transposable elements (TEs). These mobile sequences invade …

The sound of silence: mechanisms and implications of HUSH complex function

M Seczynska, PJ Lehner - Trends in Genetics, 2023 - cell.com
The vertebrate genome is under constant threat of invasion by genetic parasites. Whether
the host can immediately recognize and respond to invading elements has been unclear …

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

X Grau-Bové, C Navarrete, C Chiva… - Nature ecology & …, 2022 - nature.com
Histones and associated chromatin proteins have essential functions in eukaryotic genome
organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack …

Structural insights into the evolution of the RAG recombinase

C Liu, Y Zhang, CC Liu, DG Schatz - Nature Reviews Immunology, 2022 - nature.com
Adaptive immunity in jawed vertebrates relies on the assembly of antigen receptor genes by
the recombination activating gene 1 (RAG1)–RAG2 (collectively RAG) recombinase in a …

Molecular mechanisms of adaptive evolution in wild animals and plants

Y Hu, X Wang, Y Xu, H Yang, Z Tong, R Tian… - Science China Life …, 2023 - Springer
Wild animals and plants have developed a variety of adaptive traits driven by adaptive
evolution, an important strategy for species survival and persistence. Uncovering the …

Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression

NC Chang, Q Rovira, J Wells, C Feschotte… - Genome …, 2022 - genome.cshlp.org
There is considerable interest in understanding the effect of transposable elements (TEs) on
embryonic development. Studies in humans and mice are limited by the difficulty of working …