Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data

Z Pang, G Zhou, J Ewald, L Chang, O Hacariz… - Nature protocols, 2022 - nature.com
Liquid chromatography coupled with high-resolution mass spectrometry (LC–HRMS) has
become a workhorse in global metabolomics studies with growing applications across …

Metabolomics for investigating physiological and pathophysiological processes

DS Wishart - Physiological reviews, 2019 - journals.physiology.org
Metabolomics uses advanced analytical chemistry techniques to enable the high-throughput
characterization of metabolites from cells, organs, tissues, or biofluids. The rapid growth in …

[HTML][HTML] Tryptophan-derived microbial metabolites activate the aryl hydrocarbon receptor in tumor-associated macrophages to suppress anti-tumor immunity

K Hezaveh, RS Shinde, A Klötgen, MJ Halaby… - Immunity, 2022 - cell.com
The aryl hydrocarbon receptor (AhR) is a sensor of products of tryptophan metabolism and a
potent modulator of immunity. Here, we examined the impact of AhR in tumor-associated …

Sodium oligomannate therapeutically remodels gut microbiota and suppresses gut bacterial amino acids-shaped neuroinflammation to inhibit Alzheimer's disease …

X Wang, G Sun, T Feng, J Zhang, X Huang, T Wang… - Cell research, 2019 - nature.com
Recently, increasing evidence has suggested the association between gut dysbiosis and
Alzheimer's disease (AD) progression, yet the role of gut microbiota in AD pathogenesis …

Discovery of DRP-104, a tumor-targeted metabolic inhibitor prodrug

R Rais, KM Lemberg, L Tenora, ML Arwood, A Pal… - Science …, 2022 - science.org
6-Diazo-5-oxo-l-norleucine (DON) is a glutamine antagonist that suppresses cancer cell
metabolism but concurrently enhances the metabolic fitness of tumor CD8+ T cells. DON …

Time-restricted feeding prevents obesity and metabolic syndrome in mice lacking a circadian clock

A Chaix, T Lin, HD Le, MW Chang, S Panda - Cell metabolism, 2019 - cell.com
Increased susceptibility of circadian clock mutant mice to metabolic diseases has led to the
idea that a molecular clock is necessary for metabolic homeostasis. However, these mice …

American gut: an open platform for citizen science microbiome research

D McDonald, E Hyde, JW Debelius, JT Morton… - Msystems, 2018 - Am Soc Microbiol
Although much work has linked the human microbiome to specific phenotypes and lifestyle
variables, data from different projects have been challenging to integrate and the extent of …

Distinct regulation of Th17 and Th1 cell differentiation by glutaminase-dependent metabolism

MO Johnson, MM Wolf, MZ Madden, G Andrejeva… - Cell, 2018 - cell.com
Activated T cells differentiate into functional subsets with distinct metabolic programs.
Glutaminase (GLS) converts glutamine to glutamate to support the tricarboxylic acid cycle …

Lysosomal metabolomics reveals V-ATPase-and mTOR-dependent regulation of amino acid efflux from lysosomes

M Abu-Remaileh, GA Wyant, C Kim, NN Laqtom… - Science, 2017 - science.org
The lysosome degrades and recycles macromolecules, signals to the cytosol and nucleus,
and is implicated in many diseases. Here, we describe a method for the rapid isolation of …

Inflammation-induced IgA+ cells dismantle anti-liver cancer immunity

S Shalapour, XJ Lin, IN Bastian, J Brain, AD Burt… - Nature, 2017 - nature.com
The role of adaptive immunity in early cancer development is controversial. Here we show
that chronic inflammation and fibrosis in humans and mice with non-alcoholic fatty liver …