[HTML][HTML] Deciphering the cellular and molecular landscapes of Wnt/β-catenin signaling in mouse embryonic kidney development

H Zhao, H Gong, P Zhu, C Sun, W Sun, Y Zhou… - Computational and …, 2024 - Elsevier
Abstract Background The Wnt/β-catenin signaling pathway is critical in kidney development,
yet its specific effects on gene expression in different embryonic kidney cell types are not …

Cell-free genomics: transcription factor interactions in reconstituted naïve embryonic chromatin

PB Becker - Biochemical Society Transactions, 2024 - portlandpress.com
Extracts from Drosophila preblastoderm embryos (DREX) form the basis of a powerful in
vitro chromatin reconstitution system that assembles entire genomes into complex chromatin …

Transcription factor PBX4 regulates limb development and haematopoiesis in mice

Y Ning, S Duo, X Lin, H Zhang, J Fei, B Zhang… - Cell …, 2024 - Wiley Online Library
The mammalian Pre‐B cell leukaemia transcription factors 1–4 (PBX1‐4) constitutes the
PBC class of the homeodomain (HD)‐containing proteins, which play important roles in …

Computational modeling of aging-related gene networks: a review

JANLF Freitas, O Bischof - Frontiers in Applied Mathematics and …, 2024 - frontiersin.org
The aging process is a complex and multifaceted phenomenon affecting all living
organisms. It involves a gradual deterioration of tissue and cellular function, leading to a …

Xbp1 promotes odontoblastic differentiation through modulating mitochondrial homeostasis

D Huang, Y Li, J Han, H Zuo, H Liu… - The FASEB …, 2024 - Wiley Online Library
Odontoblast differentiation depends on the orderly recruitment of transcriptional factors (TFs)
in the transcriptional regulatory network. The depletion of crucial TFs disturbs dynamic …

TagP, a PAAR-domain containing protein, plays roles in the fitness and virulence of Acinetobacter baumannii.

Y Li, Y Cui, K Song, L Shen, L Xiao… - Frontiers in Cellular …, 2024 - search.ebscohost.com
Background: Type VI secretion system (T6SS) is widely present in Gram-negative bacteria
and directly mediates antagonistic prokaryote interactions. PAAR (proline-alanine-alanine …

An exploration of vascular cell development in mouse embryoid bodies under hypoxia through single cell RNA-seq

B Acosta-Iborra, L Puente-Santamaría, Y Berrouayel… - 2024 - researchsquare.com
Background: Differentiation of mouse stem cells (mESC) to embryonic bodies (EBs) is a
widely used approach to model early stages of development. In this study, we employed …

[HTML][HTML] Single-cell and Spatial Transcriptomics Clustering with an Optimized Adaptive K-Nearest Neighbor Graph

J Li, Y Shyr, Q Liu - bioRxiv, 2023 - ncbi.nlm.nih.gov
Single-cell and spatial transcriptomics have been widely used to characterize cellular
landscape in complex tissues. To understand cellular heterogeneity, one essential step is to …

[HTML][HTML] Lacking ARHGAP25 mitigates the symptoms of autoantibody-induced arthritis in mice

D Czárán, P Sasvári, ÁI Horváth, K Ella… - Frontiers in …, 2023 - frontiersin.org
Objective Despite intensive research on rheumatoid arthritis, the pathomechanism of the
disease is still not fully understood and the treatment has not been completely resolved …

[HTML][HTML] The increased cfRNA of TNFSF4 in peripheral blood at late gestation and preterm labor: its implication as a noninvasive biomarker for premature delivery

Z Wang, Q Ou, L Gao - Frontiers in Immunology, 2023 - frontiersin.org
Introduction Given the important roles of immune tolerance and inflammation in both preterm
and term labor, some inflammation-related genes could be related to the initiation of labor …