Systems biology in cardiovascular disease: a multiomics approach

A Joshi, M Rienks, K Theofilatos, M Mayr - Nature Reviews Cardiology, 2021 - nature.com
Omics techniques generate large, multidimensional data that are amenable to analysis by
new informatics approaches alongside conventional statistical methods. Systems theories …

Using phecodes for research with the electronic health record: from PheWAS to PheRS

L Bastarache - Annual review of biomedical data science, 2021 - annualreviews.org
Electronic health records (EHRs) are a rich source of data for researchers, but extracting
meaningful information out of this highly complex data source is challenging. Phecodes …

Multivariate analysis of 1.5 million people identifies genetic associations with traits related to self-regulation and addiction

R Karlsson Linnér, TT Mallard, PB Barr… - Nature …, 2021 - nature.com
Behaviors and disorders related to self-regulation, such as substance use, antisocial
behavior and attention-deficit/hyperactivity disorder, are collectively referred to as …

[HTML][HTML] Mapping ICD-10 and ICD-10-CM codes to phecodes: workflow development and initial evaluation

P Wu, A Gifford, X Meng, X Li, H Campbell… - JMIR medical …, 2019 - medinform.jmir.org
Background: The phecode system was built upon the International Classification of
Diseases, Ninth Revision, Clinical Modification (ICD-9-CM) for phenome-wide association …

Polygenic prediction of preeclampsia and gestational hypertension

MC Honigberg, B Truong, RR Khan, B Xiao, L Bhatta… - Nature medicine, 2023 - nature.com
Preeclampsia and gestational hypertension are common pregnancy complications
associated with adverse maternal and child outcomes. Current tools for prediction …

Evolving phenotypes of non-hospitalized patients that indicate long COVID

H Estiri, ZH Strasser, GA Brat, YR Semenov, CJ Patel… - BMC medicine, 2021 - Springer
Abstract Background For some SARS-CoV-2 survivors, recovery from the acute phase of the
infection has been grueling with lingering effects. Many of the symptoms characterized as …

Apolipoprotein E (APOE) genotype-associated disease risks: a phenome-wide, registry-based, case-control study utilising the UK Biobank

AL Lumsden, A Mulugeta, A Zhou, E Hyppönen - EBioMedicine, 2020 - thelancet.com
Background The three main alleles of the APOE gene (ε4, ε3 and ε2) carry differential risks
for conditions including Alzheimer's disease (AD) and cardiovascular disease. Due to their …

Diurnal rhythms of wrist temperature are associated with future disease risk in the UK Biobank

TG Brooks, NF Lahens, GR Grant, YI Sheline… - Nature …, 2023 - nature.com
Many chronic disease symptomatologies involve desynchronized sleep-wake cycles,
indicative of disrupted biorhythms. This can be interrogated using body temperature …

Comprehensive genetic analysis of the human lipidome identifies loci associated with lipid homeostasis with links to coronary artery disease

G Cadby, C Giles, PE Melton, K Huynh… - Nature …, 2022 - nature.com
We integrated lipidomics and genomics to unravel the genetic architecture of lipid
metabolism and identify genetic variants associated with lipid species putatively in the …

Learning from longitudinal data in electronic health record and genetic data to improve cardiovascular event prediction

J Zhao, QP Feng, P Wu, RA Lupu, RA Wilke… - Scientific reports, 2019 - nature.com
Current approaches to predicting a cardiovascular disease (CVD) event rely on
conventional risk factors and cross-sectional data. In this study, we applied machine …