Multi-PGS enhances polygenic prediction: weighting 937 polygenic scores

C Albiñana, Z Zhu, AJ Schork, A Ingason, H Aschard… - medRxiv, 2022 - medrxiv.org
The predictive performance of polygenic scores (PGS) in clinical risk models is largely
dependent on the number of samples available to train the score, together with the …

Multi-PGS enhances polygenic prediction by combining 937 polygenic scores

C Albiñana, Z Zhu, AJ Schork, A Ingason… - Nature …, 2023 - nature.com
The predictive performance of polygenic scores (PGS) is largely dependent on the number
of samples available to train the PGS. Increasing the sample size for a specific phenotype is …

[PDF][PDF] Leveraging both individual-level genetic data and GWAS summary statistics increases polygenic prediction

C Albiñana, J Grove, JJ McGrath, E Agerbo… - The American Journal of …, 2021 - cell.com
The accuracy of polygenic risk scores (PRSs) to predict complex diseases increases with the
training sample size. PRSs are generally derived based on summary statistics from large …

Improving Machine Learning Prediction of ADHD Using Gene Set Polygenic Risk Scores and Risk Scores from Genetically Correlated Phenotypes

E Barnett, Y Zhang-James, SV Faraone - MedRxiv, 2022 - medrxiv.org
Abstract Background Polygenic risk scores (PRSs), which sum the effects of SNPs
throughout the genome to measure risk afforded by common genetic variants, have …

mtPGS: Leverage multiple correlated traits for accurate polygenic score construction

C Xu, SK Ganesh, X Zhou - The American Journal of Human Genetics, 2023 - cell.com
Accurate polygenic scores (PGSs) facilitate the genetic prediction of complex traits and aid
in the development of personalized medicine. Here, we develop a statistical method called …

Using local genetic correlation improves polygenic score prediction across traits

O Pain, CM Lewis - bioRxiv, 2022 - biorxiv.org
Introduction The predictive utility of polygenic scores (PGS) is steadily increasing as genome-
wide association studies (GWAS) increase in sample size and diversity, and as PGS …

Evaluation of polygenic scoring methods in five biobanks reveals greater variability between biobanks than between methods and highlights benefits of ensemble …

R Monti, L Eick, G Hudjashov, K Läll, S Kanoni… - medRxiv, 2023 - medrxiv.org
Methods to estimate polygenic scores (PGS) from genome-wide association studies are
increasingly utilized. However, independent method evaluation is lacking, and method 15 …

Joint modeling of genetically correlated diseases and functional annotations increases accuracy of polygenic risk prediction

Y Hu, Q Lu, W Liu, Y Zhang, M Li, H Zhao - PLoS genetics, 2017 - journals.plos.org
Accurate prediction of disease risk based on genetic factors is an important goal in human
genetics research and precision medicine. Advanced prediction models will lead to more …

Predicting polygenic risk of psychiatric disorders

AR Martin, MJ Daly, EB Robinson, SE Hyman… - Biological …, 2019 - Elsevier
Genetics provides two major opportunities for understanding human disease—as a
transformative line of etiological inquiry and as a biomarker for heritable diseases. In …

[PDF][PDF] A comprehensive evaluation of polygenic score methods across cohorts in psychiatric disorders

G Ni, J Zeng, JR Revez, Y Wang, T Ge, R Restaudi… - Medrxiv, 2020 - academia.edu
Polygenic scores (PGSs), which assess the genetic risk of individuals for a disease, are 28
calculated as a weighted count of risk alleles identified in genome-wide association studies …