Single nucleus multiomic profiling reveals age-dynamic regulation of host genes associated with SARS-CoV-2 infection

A Wang, J Chiou, OB Poirion, J Buchanan, MJ Valdez… - Biorxiv, 2020 - biorxiv.org
Respiratory failure is the leading cause of COVID-19 death and disproportionately impacts
adults more than children. Here, we present a large-scale snATAC-seq dataset (90,980 …

Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes

A Wang, J Chiou, OB Poirion, J Buchanan, MJ Valdez… - Elife, 2020 - elifesciences.org
Respiratory failure associated with COVID-19 has placed focus on the lungs. Here, we
present single-nucleus accessible chromatin profiles of 90,980 nuclei and matched single …

Single cell RNA-seq data analysis reveals the potential risk of SARS-CoV-2 infection among different respiratory system conditions

Q Zhang, Y Yue, H Tan, Y Liu, Y Zeng, L Xiao - Frontiers in Genetics, 2020 - frontiersin.org
COVID-19 (Coronavirus Disease 2019) has been an ongoing pandemic, resulting in an
increase in people being infected globally. Understanding the potential risk of infection for …

The aging transcriptome and cellular landscape of the human lung in relation to SARS-CoV-2

RD Chow, M Majety, S Chen - Nature Communications, 2021 - nature.com
Age is a major risk factor for severe coronavirus disease-2019 (COVID-19). Here, we
interrogate the transcriptional features and cellular landscape of the aging human lung. By …

Single-nuclei characterization of pervasive transcriptional signatures across organs in response to COVID-19

AA Granados, S Bucher, H Song, A Agrawal, AT Chen… - Elife, 2023 - elifesciences.org
Background: Infection by coronavirus SARS-CoV2 is a severe and often deadly disease that
has implications for the respiratory system and multiple organs across the human body …

Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral …

C Muus, MD Luecken, G Eraslan, A Waghray… - BioRxiv, 2020 - biorxiv.org
The COVID-19 pandemic, caused by the novel coronavirus SARS-CoV-2, creates an urgent
need for identifying molecular mechanisms that mediate viral entry, propagation, and tissue …

System-wide transcriptome damage and tissue identity loss in COVID-19 patients

J Park, J Foox, T Hether, DC Danko, S Warren… - Cell Reports …, 2022 - cell.com
The molecular mechanisms underlying the clinical manifestations of coronavirus disease
2019 (COVID-19), and what distinguishes them from common seasonal influenza virus and …

[HTML][HTML] A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2

TM Delorey, CGK Ziegler, G Heimberg, R Normand… - Biorxiv, 2021 - ncbi.nlm.nih.gov
The SARS-CoV-2 pandemic has caused over 1 million deaths globally, mostly due to acute
lung injury and acute respiratory distress syndrome, or direct complications resulting in …

[HTML][HTML] Cellular tropism of SARS-CoV-2 across human tissues and age-related expression of ACE2 and TMPRSS2 in immune-inflammatory stromal cells

M Zheng - Aging and disease, 2021 - ncbi.nlm.nih.gov
Recently, emerging evidence has indicated that COVID-19 represents a major threat to older
populations, but the underlying mechanisms remain unclear. The pathogen causing COVID …

Regulatory dissection of the severe COVID-19 risk locus introgressed by Neanderthals

E Jagoda, D Marnetto, G Senevirathne, V Gonzalez… - elife, 2023 - elifesciences.org
Individuals infected with the SARS-CoV-2 virus present with a wide variety of symptoms
ranging from asymptomatic to severe and even lethal outcomes. Past research has revealed …