[HTML][HTML] Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models

JMM Bayer, R Dinga, SM Kia, AR Kottaram, T Wolfers… - Neuroimage, 2022 - Elsevier
The potential of normative modeling to make individualized predictions from neuroimaging
data has enabled inferences that go beyond the case-control approach. However, site …

[HTML][HTML] Fighting or embracing multiplicity in neuroimaging? neighborhood leverage versus global calibration

G Chen, PA Taylor, RW Cox, L Pessoa - NeuroImage, 2020 - Elsevier
Neuroimaging faces the daunting challenge of multiple testing–an instance of multiplicity–
that is associated with two other issues to some extent: low inference efficiency and poor …

[HTML][HTML] Combat harmonization: Empirical bayes versus fully bayes approaches

M Reynolds, T Chaudhary, ME Torbati… - NeuroImage: Clinical, 2023 - Elsevier
Studying small effects or subtle neuroanatomical variation requires large-scale sample size
data. As a result, combining neuroimaging data from multiple datasets is necessary …

Mitigating site effects in covariance for machine learning in neuroimaging data

AA Chen, JC Beer, NJ Tustison, PA Cook… - Human brain …, 2022 - Wiley Online Library
To acquire larger samples for answering complex questions in neuroscience, researchers
have increasingly turned to multi‐site neuroimaging studies. However, these studies are …

Classical and Bayesian inference in neuroimaging: applications

KJ Friston, DE Glaser, RNA Henson, S Kiebel… - Neuroimage, 2002 - Elsevier
In Friston et al.((2002) Neuroimage 16: 465–483) we introduced empirical Bayes as a
potentially useful way to estimate and make inferences about effects in hierarchical models …

[HTML][HTML] Untangling the relatedness among correlations, part III: inter-subject correlation analysis through Bayesian multilevel modeling for naturalistic scanning

G Chen, PA Taylor, X Qu, PJ Molfese, PA Bandettini… - NeuroImage, 2020 - Elsevier
While inter-subject correlation (ISC) analysis is a powerful tool for naturalistic scanning data,
drawing appropriate statistical inferences is difficult due to the daunting task of accounting …

A Bayesian spatiotemporal model for very large data sets

LM Harrison, GGR Green - NeuroImage, 2010 - Elsevier
Functional MRI provides a unique perspective of neuronal organization; however, these
data include many complex sources of spatiotemporal variability, which require spatial …

[HTML][HTML] Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data

JC Beer, NJ Tustison, PA Cook, C Davatzikos… - Neuroimage, 2020 - Elsevier
While aggregation of neuroimaging datasets from multiple sites and scanners can yield
increased statistical power, it also presents challenges due to systematic scanner effects …

Handling multiplicity in neuroimaging through Bayesian lenses with multilevel modeling

G Chen, Y Xiao, PA Taylor, JK Rajendra, T Riggins… - Neuroinformatics, 2019 - Springer
Here we address the current issues of inefficiency and over-penalization in the massively
univariate approach followed by the correction for multiple testing, and propose a more …

[HTML][HTML] Statistical agnostic mapping: A framework in neuroimaging based on concentration inequalities

JM Górriz, C Jimenez-Mesa, R Romero-Garcia… - Information …, 2021 - Elsevier
In the 1970s a novel branch of statistics emerged focusing its effort on the selection of a
function for the pattern recognition problem that would fulfill a relationship between the …