Miniaturization, genome size, and biological size in a diverse clade of salamanders

LP Decena-Segarra, L Bizjak-Mali… - The American …, 2020 - journals.uchicago.edu
Genome size (C-value) can affect organismal traits across levels of biological organization
from tissue complexity to metabolism. Neotropical salamanders show wide variation in …

Conserved enhancers control notochord expression of vertebrate Brachyury

CL Kemmler, J Smolikova, HR Moran… - Nature …, 2023 - nature.com
The cell type-specific expression of key transcription factors is central to development and
disease. Brachyury/T/TBXT is a major transcription factor for gastrulation, tailbud patterning …

[HTML][HTML] Shark and ray genomics for disentangling their morphological diversity and vertebrate evolution

S Kuraku - Developmental Biology, 2021 - Elsevier
Developmental studies of sharks and rays (elasmobranchs) have provided much insight into
the process of morphological evolution of vertebrates. Although those studies are …

Application and optimization of CRISPR–Cas9-mediated genome engineering in axolotl (Ambystoma mexicanum)

JF Fei, WPK Lou, D Knapp, P Murawala, T Gerber… - Nature …, 2018 - nature.com
Genomic manipulation is essential to the use of model organisms to understand
development, regeneration and adult physiology. The axolotl (Ambystoma mexicanum), a …

[HTML][HTML] The salmon louse genome: Copepod features and parasitic adaptations

R Skern-Mauritzen, K Malde, C Eichner, M Dondrup… - Genomics, 2021 - Elsevier
Copepods encompass numerous ecological roles including parasites, detrivores and
phytoplankton grazers. Nonetheless, copepod genome assemblies remain scarce …

Genome size does not influence extinction risk in the world's amphibians

D Pincheira‐Donoso, LP Harvey, JV Johnson… - Functional …, 2023 - Wiley Online Library
Variation in genome size spans multiple orders of magnitude among animals. Despite the
longstanding debate regarding the adaptive value or costs of genomic complexity, genome …

Parallel gene size and isoform expansion of ancient neuronal genes

MJ McCoy, AZ Fire - Current Biology, 2024 - cell.com
How nervous systems evolved is a central question in biology. A diversity of synaptic
proteins is thought to play a central role in the formation of specific synapses leading to …

[HTML][HTML] Homeostatic and regenerative neurogenesis in salamanders

A Joven, A Simon - Progress in neurobiology, 2018 - Elsevier
Large-scale regeneration in the adult central nervous system is a unique capacity of
salamanders among tetrapods. Salamanders can replace neuronal populations, repair …

[HTML][HTML] Insights into regeneration tool box: An animal model approach

AS Mehta, A Singh - Developmental biology, 2019 - Elsevier
For ages, regeneration has intrigued countless biologists, clinicians, and biomedical
engineers. In recent years, significant progress made in identification and characterization of …

Species-specific chromatin landscape determines how transposable elements shape genome evolution

Y Huang, H Shukla, YCG Lee - Elife, 2022 - elifesciences.org
Transposable elements (TEs) are selfish genetic parasites that increase their copy number
at the expense of host fitness. The 'success', or genome-wide abundance, of TEs differs …