The NIH Comparative Genomics Resource: addressing the promises and challenges of comparative genomics on human health
K Bornstein, G Gryan, ES Chang, A Marchler-Bauer… - BMC genomics, 2023 - Springer
Comparative genomics is the comparison of genetic information within and across
organisms to understand the evolution, structure, and function of genes, proteins, and non …
organisms to understand the evolution, structure, and function of genes, proteins, and non …
Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges
Repetitive elements (REs) are integral to the composition, structure, and function of
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …
Spiralian genomics and the evolution of animal genome architecture
Recent developments in sequencing technologies have greatly improved our knowledge of
phylogenetic relationships and genomic architectures throughout the tree of life. Spiralia, a …
phylogenetic relationships and genomic architectures throughout the tree of life. Spiralia, a …
SPIN enables high throughput species identification of archaeological bone by proteomics
PL Rüther, IM Husic, P Bangsgaard… - Nature …, 2022 - nature.com
Species determination based on genetic evidence is an indispensable tool in archaeology,
forensics, ecology, and food authentication. Most available analytical approaches involve …
forensics, ecology, and food authentication. Most available analytical approaches involve …
Scalable, accessible and reproducible reference genome assembly and evaluation in Galaxy
D Larivière, L Abueg, N Brajuka, C Gallardo-Alba… - Nature …, 2024 - nature.com
The Earth BioGenome Project aims to produce reference genomes for all~ 1.8 million known
eukaryotic species over the next decade 1–4. Achieving this goal will require the current …
eukaryotic species over the next decade 1–4. Achieving this goal will require the current …
Rampant loss of universal metazoan genes revealed by a chromosome-level genome assembly of the parasitic Nematomorpha
Parasites may manipulate host behavior to increase the odds of transmission or to reach the
proper environment to complete their life cycle. 1, 2 Members of the phylum Nematomorpha …
proper environment to complete their life cycle. 1, 2 Members of the phylum Nematomorpha …
Revealing the uncharacterised diversity of amphibian and reptile viruses
EF Harding, AG Russo, GJH Yan… - ISME …, 2022 - academic.oup.com
Amphibians and non-avian reptiles represent a significant proportion of terrestrial
vertebrates, however knowledge of their viruses is not proportional to their abundance …
vertebrates, however knowledge of their viruses is not proportional to their abundance …
crabs—A software program to generate curated reference databases for metabarcoding sequencing data
The measurement of biodiversity is an integral aspect of life science research. With the
establishment of second‐and third‐generation sequencing technologies, an increasing …
establishment of second‐and third‐generation sequencing technologies, an increasing …
[HTML][HTML] Prioritizing taxa for genetic reference database development to advance inland water conservation
Biodiversity loss has accelerated over the past century and freshwater species overall are
among those experiencing greatest declines. Genetic resources have the potential to help …
among those experiencing greatest declines. Genetic resources have the potential to help …
Whole genome assemblies of Zophobas morio and Tenebrio molitor
S Kaur, SA Stinson, GC diCenzo - G3: Genes, Genomes …, 2023 - academic.oup.com
Zophobas morio (= Zophobas atratus) and Tenebrio molitor are darkling beetles with
industrial importance due to their use as feeder insects and their apparent ability to …
industrial importance due to their use as feeder insects and their apparent ability to …