[HTML][HTML] Alternative splicing: new insights from global analyses

BJ Blencowe - Cell, 2006 - cell.com
Recent analyses of sequence and microarray data have suggested that alternative splicing
plays a major role in the generation of proteomic and functional diversity in metazoan …

Microarray technology: beyond transcript profiling and genotype analysis

JD Hoheisel - Nature reviews genetics, 2006 - nature.com
Understanding complex functional mechanisms requires the global and parallel analysis of
different cellular processes. DNA microarrays have become synonymous with this kind of …

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences

O Kikin, L D'Antonio, PS Bagga - Nucleic acids research, 2006 - academic.oup.com
The quadruplex structures formed by guanine-rich nucleic acid sequences have received
significant attention recently because of growing evidence for their role in important …

Cell-type-specific signatures of microRNAs on target mRNA expression

P Sood, A Krek, M Zavolan… - Proceedings of the …, 2006 - National Acad Sciences
Although it is known that the human genome contains hundreds of microRNA (miRNA)
genes and that each miRNA can regulate a large number of mRNA targets, the overall effect …

RNA-mediated neuromuscular disorders

LPW Ranum, TA Cooper - Annu. Rev. Neurosci., 2006 - annualreviews.org
Abstract Myotonic dystrophy type 1 (DM1) is caused by a CTG expansion mutation located in
the 3′ untranslated portion of the dystrophica myotonin protein kinase gene. The …

Characterization and prediction of alternative splice sites

M Wang, A Marín - Gene, 2006 - Elsevier
Human alternative isoform, cryptic, skipped, and constitutive splice sites from the
ALTEXTRON database were analysed regarding splice site strength, composition, GC …

Expression profiles of 50 xenobiotic transporter genes in humans and pre-clinical species: a resource for investigations into drug disposition

K Bleasby, JC Castle, CJ Roberts, C Cheng… - Xenobiotica, 2006 - Taylor & Francis
Carrier-mediated transporters play a critical role in xenobiotic disposition and transporter
research is complicated by species differences and their selective tissue expression. The …

A-to-I RNA editing and human disease

S Maas, Y Kawahara, KM Tamburro, K Nishikura - RNA biology, 2006 - Taylor & Francis
The post-transcriptional modification of mammalian transcripts by A-to-I RNA editing has
beenrecognized as an important mechanism for the generation of molecular diversity and …

The biology of intron gain and loss

DC Jeffares, T Mourier, D Penny - TRENDS in Genetics, 2006 - cell.com
Intron density in eukaryote genomes varies by more than three orders of magnitude, so there
must have been extensive intron gain and/or intron loss during evolution. A favored and …

Alternative splicing and RNA selection pressure—evolutionary consequences for eukaryotic genomes

Y Xing, C Lee - Nature Reviews Genetics, 2006 - nature.com
Genome-wide analyses of alternative splicing have established its nearly ubiquitous role in
gene regulation in many organisms. Genome sequencing and comparative genomics have …