Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome

E Babaylova, D Graifer, A Malygin, J Stahl… - Nucleic acids …, 2009 - academic.oup.com
The 5′-untranslated region of the hepatitis C virus (HCV) RNA contains a highly structured
motif called IRES (Internal Ribosome Entry Site) responsible for the cap-independent …

A short motif in Drosophila SECIS Binding Protein 2 provides differential binding affinity to SECIS RNA hairpins

A Takeuchi, D Schmitt, C Chapple… - Nucleic acids …, 2009 - academic.oup.com
Selenoproteins contain the amino acid selenocysteine which is encoded by a UGA Sec
codon. Recoding UGA Sec requires a complex mechanism, comprising the cis-acting SECIS …

The human large subunit ribosomal protein L36A-like contacts the CCA end of P-site bound tRNA

S Baouz, A Woisard, S Sinapah, JP Le Caer… - Biochimie, 2009 - Elsevier
Periodate-oxidized tRNA (tRNAox), the 2′, 3′-dialdehyde derivative of tRNA, was used as
a zero-length active site-directed affinity labeling reagent, to covalently label proteins at the …

Sites of 18S rRNA contacting mRNA 3′ and 5′ of the P site codon in human ribosome: A cross-linking study with mRNAs carrying 4-thiouridines at specific positions

K Bulygin, S Baouz-Drahy, D Graifer, A Favre… - … et Biophysica Acta (BBA …, 2009 - Elsevier
Long synthetic mRNAs were used to study the positioning of the E site codon, the 2nd and
3rd nucleotides of the A site bound codon and a nucleotide 3′ of this codon with respect to …

Binding of the IRES of hepatitis C virus RNA to the 40S ribosomal subunit: Role of p40

AA Malygin, ZV Bochkaeva, EI Bondarenko… - Molecular biology, 2009 - Springer
Ribosomal protein p40 is a structural component of the eukaryotic 40S ribosomal subunit, is
partly homologous to prokaryotic ribosomal protein S2, and has a long eukaryote-specific C …

Связывание IRES-элемента РНК вируса гепатита С 40S субчастицей рибосомы: роль белка p40

АА Малыгин, ЗВ Бочкаева, ЕИ Бондаренко… - Молекулярная …, 2009 - elibrary.ru
Рибосомный белок p40 структурный элемент малой субчастицы эукариотической
рибосомы, частично гомологичен прокариотическому рибосомному белку S2, но …

МОЛЕКУЛЯРНОЕ ОКРУЖЕНИЕ СУБДОМЕНА IIId IRES-ЭЛЕМЕНТА РНК ВИРУСА ГЕПАТИТА С НА 40S СУБЧАСТИЦЕ РИБОСОМЫ ЧЕЛОВЕКА

ЕС Бабайлова, ДМ Грайфер, АА Малыгин… - Биоорганическая …, 2009 - elibrary.ru
Изучено молекулярное окружение ключевого субдомена IIId внутреннего рибосомного
сайта посадки (IRES-элемента) в РНК вируса гепатита С (HCV) в бинарном комплексе с …

Molecular environment of the IIId subdomain of the IRES element of hepatitits C virus RNA on the human 40S ribosomal subunit

ES Babaylova, DM Graifer, AA Malygin… - Russian Journal of …, 2009 - Springer
The molecular environment of the key subdomain IIId of the internal ribosome entry site
(IRES) element of hepatitis C virus (HCV) RNA in the binary complex with the human 40S …