[PDF][PDF] Temporal specification and bilaterality of human neocortical topographic gene expression

M Pletikos, AMM Sousa, G Sedmak, KA Meyer, Y Zhu… - Neuron, 2014 - cell.com
Transcriptional events involved in the development of human cerebral neocortex are poorly
understood. Here, we analyzed the temporal dynamics and laterality of gene expression in …

[PDF][PDF] Transcriptional consequences of 16p11. 2 deletion and duplication in mouse cortex and multiplex autism families

I Blumenthal, A Ragavendran, S Erdin, L Klei… - The American Journal of …, 2014 - cell.com
Reciprocal copy-number variation (CNV) of a 593 kb region of 16p11. 2 is a common
genetic cause of autism spectrum disorder (ASD), yet it is not completely penetrant and can …

Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon …

L Josset, N Tchitchek, LE Gralinski, MT Ferris… - RNA biology, 2014 - Taylor & Francis
The outcome of respiratory virus infection is determined by a complex interplay of viral and
host factors. Some potentially important host factors for the antiviral response, whose …

[HTML][HTML] Analysis of Global Gene Expression in Brachypodium distachyon Reveals Extensive Network Plasticity in Response to Abiotic Stress

HD Priest, SE Fox, ER Rowley, JR Murray… - PLoS …, 2014 - journals.plos.org
Brachypodium distachyon is a close relative of many important cereal crops. Abiotic stress
tolerance has a significant impact on productivity of agriculturally important food and …

[HTML][HTML] Identification and functional analysis of long non-coding RNAs in mouse cleavage stage embryonic development based on single cell transcriptome data

K Zhang, K Huang, Y Luo, S Li - BMC genomics, 2014 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) regulate embryonic development
and cell fate decision in various ways, such as modulation of chromatin modification and …

[HTML][HTML] Generalization of clustering coefficients to signed correlation networks

G Costantini, M Perugini - PloS one, 2014 - journals.plos.org
The recent interest in network analysis applications in personality psychology and
psychopathology has put forward new methodological challenges. Personality and …

[HTML][HTML] RNA-sequencing reveals early, dynamic transcriptome changes in the corollas of pollinated petunias

SR Broderick, S Wijeratne, AJ Wijeratn, LJ Chapin… - BMC plant biology, 2014 - Springer
Background Pollination reduces flower longevity in many angiosperms by accelerating
corolla senescence. This response requires hormone signaling between the floral organs …

[HTML][HTML] An integrative analysis of meningioma tumors reveals the determinant genes and pathways of malignant transformation

JC Iglesias Gómez, A Mosquera Orgueira - Frontiers in oncology, 2014 - frontiersin.org
Meningiomas are frequent central nervous system neoplasms, which despite their
predominant benignity, show sporadically malignant behavior. Type 2 neurofibromatosis …

Quantitative transcriptome analysis using RNA-seq

C Külahoglu, A Bräutigam - Plant Circadian Networks: Methods and …, 2014 - Springer
RNA-seq has emerged as the technology of choice to quantify gene expression. This
technology is a convenient accurate tool to quantify diurnal changes in gene expression …

Gene expression profile of cytokines and chemokines in skin lesions from Brazilian Indians with localized cutaneous leishmaniasis

MF Costa-Silva, LI Gomes, OA Martins-Filho… - Molecular …, 2014 - Elsevier
Cutaneous leishmaniasis (CL) is a chronic inflammatory disease caused by dermotropic
Leishmania species belonging to the Viannia subgenera, with Leishmania (V.) braziliensis …