Moving forward: Challenges and directions for psychopathological network theory and methodology

EI Fried, AOJ Cramer - Perspectives on Psychological …, 2017 - journals.sagepub.com
Since the introduction of mental disorders as networks of causally interacting symptoms, this
novel framework has received considerable attention. The past years have resulted in over …

Small-world brain networks revisited

DS Bassett, ET Bullmore - The Neuroscientist, 2017 - journals.sagepub.com
It is nearly 20 years since the concept of a small-world network was first quantitatively
defined, by a combination of high clustering and short path length; and about 10 years since …

Sex-specific transcriptional signatures in human depression

B Labonté, O Engmann, I Purushothaman, C Menard… - Nature medicine, 2017 - nature.com
Major depressive disorder (MDD) is a leading cause of disease burden worldwide. While the
incidence, symptoms and treatment of MDD all point toward major sex differences, the …

Understanding tissue-specific gene regulation

AR Sonawane, J Platig, M Fagny, CY Chen… - Cell reports, 2017 - cell.com
Although all human tissues carry out common processes, tissues are distinguished by gene
expression patterns, implying that distinct regulatory programs control tissue specificity. In …

Sulforaphane reduces hepatic glucose production and improves glucose control in patients with type 2 diabetes

AS Axelsson, E Tubbs, B Mecham, S Chacko… - Science translational …, 2017 - science.org
A potentially useful approach for drug discovery is to connect gene expression profiles of
disease-affected tissues (“disease signatures”) to drug signatures, but it remains to be …

WGCNA application to proteomic and metabolomic data analysis

G Pei, L Chen, W Zhang - Methods in enzymology, 2017 - Elsevier
Progresses in mass spectrometric instrumentation and bioinformatics identification
algorithms made over the past decades allow quantitative measurements of relative or …

xMSannotator: an R package for network-based annotation of high-resolution metabolomics data

K Uppal, DI Walker, DP Jones - Analytical chemistry, 2017 - ACS Publications
Improved analytical technologies and data extraction algorithms enable detection of> 10
000 reproducible signals by liquid chromatography–high-resolution mass spectrometry …

The microbiome in posttraumatic stress disorder and trauma-exposed controls: an exploratory study

SMJ Hemmings, S Malan-Müller… - Psychosomatic …, 2017 - journals.lww.com
Objective Inadequate immunoregulation and elevated inflammation may be risk factors for
posttraumatic stress disorder (PTSD), and microbial inputs are important determinants of …

Germline Chd8 haploinsufficiency alters brain development in mouse

AL Gompers, L Su-Feher, J Ellegood, NA Copping… - Nature …, 2017 - nature.com
The chromatin remodeling gene CHD8 represents a central node in neurodevelopmental
gene networks implicated in autism. We examined the impact of germline heterozygous …

Oncogenic long noncoding RNA landscape in breast cancer

S Xu, D Kong, Q Chen, Y Ping, D Pang - Molecular cancer, 2017 - Springer
Abstract Background Few long noncoding RNAs (lncRNAs) that act as oncogenic genes in
breast cancer have been identified. Methods Oncogenic lncRNAs associated with …