Dynamic DNA methylation: In the right place at the right time
The classical model of cytosine DNA methylation (the presence of 5-methylcytosine, 5mC)
regulation depicts this covalent modification as a stable repressive regulator of promoter …
regulation depicts this covalent modification as a stable repressive regulator of promoter …
The Arabidopsis bZIP transcription factor family—an update
Highlights•bZIPs are evolutionarily conserved eukaryotic transcription factors.•The
Arabidopsis bZIP family consists of 78 members classified into 13 groups.•bZIPs perform a …
Arabidopsis bZIP family consists of 78 members classified into 13 groups.•bZIPs perform a …
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
Abstract JASPAR (http://jaspar. genereg. net) is an open-access database of curated, non-
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …
Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules
The transcriptional regulatory structure of plant genomes remains poorly defined relative to
animals. It is unclear how many cis-regulatory elements exist, where these elements lie …
animals. It is unclear how many cis-regulatory elements exist, where these elements lie …
A NAC transcription factor, NOR-like1, is a new positive regulator of tomato fruit ripening
Y Gao, W Wei, X Zhao, X Tan, Z Fan… - Horticulture …, 2018 - academic.oup.com
Ripening of the model fruit tomato (Solanum lycopersicum) is controlled by a transcription
factor network including NAC (NAM, ATAF1/2, and CUC2) domain proteins such as No …
factor network including NAC (NAM, ATAF1/2, and CUC2) domain proteins such as No …
Downregulation of RdDM during strawberry fruit ripening
Background Recently, DNA methylation was proposed to regulate fleshy fruit ripening.
Fleshy fruits can be distinguished by their ripening process as climacteric fruits, such as …
Fleshy fruits can be distinguished by their ripening process as climacteric fruits, such as …
Auxin response factors: output control in auxin biology
The phytohormone auxin is involved in almost all developmental processes in land plants.
Most, if not all, of these processes are mediated by changes in gene expression. Auxin acts …
Most, if not all, of these processes are mediated by changes in gene expression. Auxin acts …
A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development
Cytokinin fulfills its diverse roles in planta through a series of transcriptional responses. We
identify the in vivo DNA binding site profiles for three genetically redundant type-B …
identify the in vivo DNA binding site profiles for three genetically redundant type-B …
The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family
Abstract AUXIN RESPONSE FACTORS (ARFs) are plant-specific transcription factors (TFs)
that couple perception of the hormone auxin to gene expression programs essential to all …
that couple perception of the hormone auxin to gene expression programs essential to all …
Repression of nitrogen starvation responses by members of the Arabidopsis GARP-type transcription factor NIGT1/HRS1 subfamily
T Kiba, J Inaba, T Kudo, N Ueda, M Konishi… - The Plant …, 2018 - academic.oup.com
Nitrogen (N) is often a limiting nutrient whose availability determines plant growth and
productivity. Because its availability is often low and/or not uniform over time and space in …
productivity. Because its availability is often low and/or not uniform over time and space in …