New approaches for genome assembly and scaffolding

ES Rice, RE Green - Annual review of animal biosciences, 2019 - annualreviews.org
Affordable, high-throughput DNA sequencing has accelerated the pace of genome
assembly over the past decade. Genome assemblies from high-throughput, short-read …

Breaking therapy resistance: an update on oncolytic newcastle disease virus for improvements of cancer therapy

V Schirrmacher, S van Gool, W Stuecker - Biomedicines, 2019 - mdpi.com
Resistance to therapy is a major obstacle to cancer treatment. It may exist from the
beginning, or it may develop during therapy. The review focusses on oncolytic Newcastle …

Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

L Chen, Q Qiu, YU Jiang, K Wang, Z Lin, Z Li, F Bibi… - Science, 2019 - science.org
INTRODUCTION The ruminants are one of the most successful mammalian lineages,
exhibiting extensive morphological and ecological diversity and containing several key …

Earth history and the passerine superradiation

CH Oliveros, DJ Field, DT Ksepka… - Proceedings of the …, 2019 - National Acad Sciences
Avian diversification has been influenced by global climate change, plate tectonic
movements, and mass extinction events. However, the impact of these factors on the …

Convergent regulatory evolution and loss of flight in paleognathous birds

TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu… - Science, 2019 - science.org
A core question in evolutionary biology is whether convergent phenotypic evolution is driven
by convergent molecular changes in proteins or regulatory regions. We combined …

The evolutionary relationship among beak shape, mechanical advantage, and feeding ecology in modern birds

G Navalón, JA Bright, J Marugán-Lobón, EJ Rayfield - Evolution, 2019 - academic.oup.com
Extensive research on avian adaptive radiations has led to a presumption that beak
morphology predicts feeding ecology in birds. However, this ecomorphological relationship …

Immune genes are hotspots of shared positive selection across birds and mammals

AJ Shultz, TB Sackton - Elife, 2019 - elifesciences.org
Consistent patterns of positive selection in functionally similar genes can suggest a common
selective pressure across a group of species. We use alignments of orthologous protein …

Multi-allele species reconstruction using ASTRAL

M Rabiee, E Sayyari, S Mirarab - Molecular phylogenetics and evolution, 2019 - Elsevier
Genome-wide phylogeny reconstruction is becoming increasingly common, and one driving
factor behind these phylogenomic studies is the promise that the potential discordance …

Genomes of skipper butterflies reveal extensive convergence of wing patterns

W Li, Q Cong, J Shen, J Zhang… - Proceedings of the …, 2019 - National Acad Sciences
For centuries, biologists have used phenotypes to infer evolution. For decades, a handful of
gene markers have given us a glimpse of the genotype to combine with phenotypic traits …

[HTML][HTML] Egg quality and egg albumen property of domestic chicken, duck, goose, turkey, quail, and pigeon

C Sun, J Liu, N Yang, G Xu - Poultry science, 2019 - Elsevier
Poultry eggs from different species varied significantly, due to their divergent process of
evolution. However, the information on egg characteristics has been limited mostly to …