[HTML][HTML] The role of the gut microbiome in predicting response to diet and the development of precision nutrition models. Part II: results

RL Hughes, ME Kable, M Marco, NL Keim - Advances in nutrition, 2019 - Elsevier
The gut microbiota is increasingly implicated in the health and metabolism of its human host.
The host's diet is a major component influencing the composition and function of the gut …

Microplastics from mulching film is a distinct habitat for bacteria in farmland soil

M Zhang, Y Zhao, X Qin, W Jia, L Chai, M Huang… - Science of the Total …, 2019 - Elsevier
Microplastics, as an emerging pollutant of global importance, have been well documented in
aquatic ecosystems. However, little is known about the effects of microplastics on …

Molecular signature of subtypes of non-small-cell lung cancer by large-scale transcriptional profiling: identification of key modules and genes by weighted gene co …

M Niemira, F Collin, A Szalkowska, A Bielska… - Cancers, 2019 - mdpi.com
Non-small-cell lung cancer (NSCLC) represents a heterogeneous group of malignancies
consisting essentially of adenocarcinoma (ADC) and squamous cell carcinoma (SCC) …

[HTML][HTML] Genetic control of expression and splicing in developing human brain informs disease mechanisms

RL Walker, G Ramaswami, C Hartl, N Mancuso… - Cell, 2019 - cell.com
Tissue-specific regulatory regions harbor substantial genetic risk for disease. Because brain
development is a critical epoch for neuropsychiatric disease susceptibility, we characterized …

Co-regulation map of the human proteome enables identification of protein functions

G Kustatscher, P Grabowski, TA Schrader… - Nature …, 2019 - nature.com
Assigning functions to the vast array of proteins present in eukaryotic cells remains
challenging. To identify relationships between proteins, and thereby enable functional …

Spartina alterniflora invasion alters soil bacterial communities and enhances soil N2O emissions by stimulating soil denitrification in mangrove wetland

GF Gao, PF Li, JX Zhong, ZJ Shen, J Chen, YT Li… - Science of the Total …, 2019 - Elsevier
Chinese mangrove, an important ecosystem in coastal wetlands, is sensitive to the invasive
alien species Spartina alterniflora. However, the effects of the S. alterniflora invasion on …

Associations between fungal and bacterial microbiota of airways and asthma endotypes

A Sharma, B Laxman, ET Naureckas… - Journal of Allergy and …, 2019 - Elsevier
Background The relationship between asthma, atopy, and underlying type 2 (T2) airway
inflammation is complex. Although the bacterial airway microbiota is known to differ in …

Inferring and analyzing module-specific lncRNA–mRNA causal regulatory networks in human cancer

J Zhang, TD Le, L Liu, J Li - Briefings in bioinformatics, 2019 - academic.oup.com
It is known that noncoding RNAs (ncRNAs) cover∼ 98% of the transcriptome, but do not
encode proteins. Among ncRNAs, long noncoding RNAs (lncRNAs) are a large and diverse …

Identification of prognostic candidate genes in breast cancer by integrated bioinformatic analysis

CCN Wang, CY Li, JH Cai, PCY Sheu, JJP Tsai… - Journal of clinical …, 2019 - mdpi.com
Breast cancer is one of the most common malignancies. However, the molecular
mechanisms underlying its pathogenesis remain to be elucidated. The present study aimed …

Two-step maternal-to-zygotic transition with two-phase parental genome contributions

P Zhao, X Zhou, K Shen, Z Liu, T Cheng, D Liu… - Developmental Cell, 2019 - cell.com
The maternal-to-zygotic transition (MZT) is an essential developmental turning point in both
plants and animals. In plants, the timing of MZT and parental contributions to the zygotic …