Systems-based proteomics to resolve the biology of Alzheimer's disease beyond amyloid and tau

S Rayaprolu, L Higginbotham, P Bagchi… - …, 2021 - nature.com
The repeated failures of amyloid-targeting therapies have challenged our narrow
understanding of Alzheimer's disease (AD) pathogenesis and inspired wide-ranging …

Machine learning identifies candidates for drug repurposing in Alzheimer's disease

S Rodriguez, C Hug, P Todorov, N Moret… - Nature …, 2021 - nature.com
Clinical trials of novel therapeutics for Alzheimer's Disease (AD) have consumed a large
amount of time and resources with largely negative results. Repurposing drugs already …

Molecular subtyping of Alzheimer's disease using RNA sequencing data reveals novel mechanisms and targets

RA Neff, M Wang, S Vatansever, L Guo, C Ming… - Science …, 2021 - science.org
Alzheimer's disease (AD), the most common form of dementia, is recognized as a
heterogeneous disease with diverse pathophysiologic mechanisms. In this study, we …

[HTML][HTML] Transformative network modeling of multi-omics data reveals detailed circuits, key regulators, and potential therapeutics for Alzheimer's disease

M Wang, A Li, M Sekiya, ND Beckmann, X Quan… - Neuron, 2021 - cell.com
To identify the molecular mechanisms and novel therapeutic targets of late-onset
Alzheimer's Disease (LOAD), we performed an integrative network analysis of multi-omics …

Heterogeneity and molecular markers for CNS glial cells revealed by single-cell transcriptomics

J Sun, Y Song, Z Chen, J Qiu, S Zhu, L Wu… - Cellular and Molecular …, 2021 - Springer
Glial cells, including astrocytes, oligodendrocytes, and microglia, are the major components
in the central nervous system (CNS). Studies have revealed the heterogeneity of each glial …

Diversified transcriptional responses of myeloid and glial cells in spinal cord injury shaped by HDAC3 activity

S Wahane, X Zhou, X Zhou, L Guo, MS Friedl… - Science …, 2021 - science.org
The innate immune response influences neural repair after spinal cord injury (SCI). Here, we
combined myeloid-specific transcriptomics and single-cell RNA sequencing to uncover not …

Evolutionary conservation and divergence of the human brain transcriptome

WG Pembroke, CL Hartl, DH Geschwind - Genome biology, 2021 - Springer
Background Mouse models have allowed for the direct interrogation of genetic effects on
molecular, physiological, and behavioral brain phenotypes. However, it is unknown to what …

CPA: a web-based platform for consensus pathway analysis and interactive visualization

H Nguyen, D Tran, JM Galazka, SV Costes… - Nucleic Acids …, 2021 - academic.oup.com
In molecular biology and genetics, there is a large gap between the ease of data collection
and our ability to extract knowledge from these data. Contributing to this gap is the fact that …

[HTML][HTML] Single-cell transcriptional changes in neurodegenerative diseases

A Ahmadi, JD Gispert, A Navarro, N Vilor-Tejedor… - Neuroscience, 2021 - Elsevier
In recent decades, our understanding of the molecular changes involved in
neurodegenerative diseases has been transformed. Single-cell RNA sequencing and single …

Machine learning compensates fold-change method and highlights oxidative phosphorylation in the brain transcriptome of Alzheimer's disease

J Cheng, HP Liu, WY Lin, FJ Tsai - Scientific reports, 2021 - nature.com
Alzheimer's disease (AD) is a neurodegenerative disorder causing 70% of dementia cases.
However, the mechanism of disease development is still elusive. Despite the availability of a …