Artificial intelligence in cancer research and precision medicine

B Bhinder, C Gilvary, NS Madhukar, O Elemento - Cancer discovery, 2021 - AACR
Artificial intelligence (AI) is rapidly reshaping cancer research and personalized clinical
care. Availability of high-dimensionality datasets coupled with advances in high …

[HTML][HTML] A review on machine learning approaches and trends in drug discovery

P Carracedo-Reboredo, J Liñares-Blanco… - Computational and …, 2021 - Elsevier
Drug discovery aims at finding new compounds with specific chemical properties for the
treatment of diseases. In the last years, the approach used in this search presents an …

[HTML][HTML] Artificial intelligence in drug discovery: what is realistic, what are illusions? Part 1: Ways to make an impact, and why we are not there yet

A Bender, I Cortés-Ciriano - Drug discovery today, 2021 - Elsevier
Highlights•Artificial Intelligence (AI) has transformed many areas such as speech and image
recognition, but not yet drug discovery.•Approaches to AI in drug discovery need to take in …

Deep learning identifies synergistic drug combinations for treating COVID-19

W Jin, JM Stokes, RT Eastman, Z Itkin… - Proceedings of the …, 2021 - National Acad Sciences
Effective treatments for COVID-19 are urgently needed. However, discovering single-agent
therapies with activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV …

[HTML][HTML] Drug ranking using machine learning systematically predicts the efficacy of anti-cancer drugs

H Gerdes, P Casado, A Dokal, M Hijazi… - Nature …, 2021 - nature.com
Artificial intelligence and machine learning (ML) promise to transform cancer therapies by
accurately predicting the most appropriate therapies to treat individual patients. Here, we …

Deep learning for drug response prediction in cancer

D Baptista, PG Ferreira, M Rocha - Briefings in bioinformatics, 2021 - academic.oup.com
Predicting the sensitivity of tumors to specific anti-cancer treatments is a challenge of
paramount importance for precision medicine. Machine learning (ML) algorithms can be …

[HTML][HTML] TranSynergy: Mechanism-driven interpretable deep neural network for the synergistic prediction and pathway deconvolution of drug combinations

Q Liu, L Xie - PLoS computational biology, 2021 - journals.plos.org
Drug combinations have demonstrated great potential in cancer treatments. They alleviate
drug resistance and improve therapeutic efficacy. The fast-growing number of anti-cancer …

DrugComb update: a more comprehensive drug sensitivity data repository and analysis portal

S Zheng, J Aldahdooh, T Shadbahr… - Nucleic acids …, 2021 - academic.oup.com
Combinatorial therapies that target multiple pathways have shown great promises for
treating complex diseases. DrugComb (https://drugcomb. org/) is a web-based portal for the …

[PDF][PDF] Machine learning for perturbational single-cell omics

Y Ji, M Lotfollahi, FA Wolf, FJ Theis - Cell Systems, 2021 - cell.com
Cell biology is fundamentally limited in its ability to collect complete data on cellular
phenotypes and the wide range of responses to perturbation. Areas such as computer vision …

Comparative analysis of molecular fingerprints in prediction of drug combination effects

B Zagidullin, Z Wang, Y Guan… - Briefings in …, 2021 - academic.oup.com
Application of machine and deep learning methods in drug discovery and cancer research
has gained a considerable amount of attention in the past years. As the field grows, it …