Although bifidobacteria are widely used as probiotics, their metabolism and physiology
remain to be explored in depth. In this work, strain-specific genome-scale metabolic models …

Background Saccharomyces cerevisiae is a well-known popular model system for basic
biological studies and serves as a host organism for the heterologous production of …

Dihydroxybenzoate (protocatechuate, PCA) is a phenolic compound naturally found in
edible vegetables and medicinal herbs. PCA is of high interest in the chemical industry and …

Thraustochytrids are marine heterotrophic microorganisms known for their potential to
accumulate docosahexaenoic acid (DHA)-enriched lipids. There have been many attempts …

13C metabolic flux analysis (MFA) has become an indispensable tool to measure metabolic
reaction rates (fluxes) in living organisms, having an increasingly diverse range of …

Increasing genome-wide data in biological sciences and medicine has contributed to the
development of a variety of visualization tools. Several automatic, semiautomatic, and …

Motivation Large metabolic models, including genome-scale metabolic models, are
nowadays common in systems biology, biotechnology and pharmacology. They typically …

Visualisations of metabolites and metabolic pathways have been used since the early years
of research in biology, and pathway maps have become very popular in biochemistry …

3, 4-Dihydroxybenzoate (protocatechuate, PCA) is a phenolic compound naturally found in
edible vegetables and medicinal herbs. PCA is of interest in the chemical industry as a …

One of the most important limitations of mammalian cells-based bioprocesses, and
particularly hybridoma cell lines, is the accelerated metabolism related to glucose and …