[HTML][HTML] Mechanism of SARS-CoV-2 polymerase stalling by remdesivir

G Kokic, HS Hillen, D Tegunov, C Dienemann… - Nature …, 2021 - nature.com
Remdesivir is the only FDA-approved drug for the treatment of COVID-19 patients. The
active form of remdesivir acts as a nucleoside analog and inhibits the RNA-dependent RNA …

Structural basis for backtracking by the SARS-CoV-2 replication–transcription complex

B Malone, J Chen, Q Wang… - Proceedings of the …, 2021 - National Acad Sciences
Backtracking, the reverse motion of the transcriptase enzyme on the nucleic acid template, is
a universal regulatory feature of transcription in cellular organisms but its role in viruses is …

Nanopores: a versatile tool to study protein dynamics

S Schmid, C Dekker - Essays in biochemistry, 2021 - portlandpress.com
Proteins are the active workhorses in our body. These biomolecules perform all vital cellular
functions from DNA replication and general biosynthesis to metabolic signaling and …

Mechanisms of inhibition of viral RNA replication by nucleotide analogs

KA Johnson, T Dangerfield - The Enzymes, 2021 - Elsevier
Nucleotide analogs are the cornerstone of direct acting antivirals used to control infection by
RNA viruses. Here we review what is known about existing nucleotide/nucleoside analogs …

Structural insight into the substrate scope of viperin and viperin-like enzymes from three domains of life

JC Lachowicz, AS Gizzi, SC Almo, TL Grove - Biochemistry, 2021 - ACS Publications
Viperin is a member of the radical S-adenosylmethionine superfamily and has been shown
to restrict the replication of a wide range of RNA and DNA viruses. We recently …

[HTML][HTML] The nucleotide addition cycle of the SARS-CoV-2 polymerase

SC Bera, M Seifert, RN Kirchdoerfer, P van Nies… - Cell reports, 2021 - cell.com
Coronaviruses have evolved elaborate multisubunit machines to replicate and transcribe
their genomes. Central to these machines are the RNA-dependent RNA polymerase subunit …

Chemical synthesis of the antiviral nucleotide analogue ddhCTP

JM Wood, GB Evans, TL Grove, SC Almo… - The Journal of …, 2021 - ACS Publications
3′-Deoxy-3′, 4′-didehydro-cytidine triphosphate (ddhCTP) is a novel antiviral molecule
produced by the enzyme viperin as part of the innate immune response. ddhCTP has been …

A chemical strategy for intracellular arming of an endogenous broad-Spectrum antiviral nucleotide

KT Passow, HS Caldwell, KA Ngo… - Journal of medicinal …, 2021 - ACS Publications
The naturally occurring nucleotide 3′-deoxy-3′, 4′-didehydro-cytidine-5′-triphosphate
(ddhCTP) was recently found to exert potent and broad-spectrum antiviral activity. However …

Ensemble cryo-electron microscopy reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex

J Chen, Q Wang, B Malone, E Llewellyn, Y Pechersky… - bioRxiv, 2021 - biorxiv.org
The SARS-CoV-2 nonstructural proteins coordinate genome replication and gene
expression. Structural analyses revealed the basis for coupling of the essential nsp13 …