Towards a structurally resolved human protein interaction network

DF Burke, P Bryant, I Barrio-Hernandez… - Nature Structural & …, 2023 - nature.com
Cellular functions are governed by molecular machines that assemble through protein-
protein interactions. Their atomic details are critical to studying their molecular mechanisms …

[HTML][HTML] Pervasive mislocalization of pathogenic coding variants underlying human disorders

J Lacoste, M Haghighi, S Haider, ZY Lin, D Segal… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Widespread sequencing has yielded thousands of missense variants predicted or confirmed
as disease-causing. This creates a new bottleneck: determining the functional impact of …

Challenges in bridging the gap between protein structure prediction and functional interpretation

M Varadi, M Tsenkov, S Velankar - Proteins: Structure, Function …, 2023 - Wiley Online Library
The rapid evolution of protein structure prediction tools has significantly broadened access
to protein structural data. Although predicted structure models have the potential to …

The Extent of Edgetic Perturbations in the Human Interactome Caused by Population-Specific Mutations

H Cui, S Srinivasan, Z Gao, D Korkin - Biomolecules, 2023 - mdpi.com
Until recently, efforts in population genetics have been focused primarily on people of
European ancestry. To attenuate this bias, global population studies, such as the 1000 …

Initial Investigations of Intrinsically Disordered Regions in Inherited Retinal Diseases

KE Lee, R Procopio, JS Pulido, KB Gunton - International Journal of …, 2023 - mdpi.com
Intrinsically disordered regions (IDRs) are protein regions that are unable to fold into stable
tertiary structures, enabling their involvement in key signaling and regulatory functions via …

AI in Genomics and Epigenomics

V Fishman, M Sindeeva, N Chekanov… - Artificial Intelligence for …, 2023 - Springer
Genetics is an important factor determining the predisposition to the development of many
diseases and influencing the overall life expectancy of a person. We have already discussed …

[HTML][HTML] Structurally-informed human interactome reveals proteome-wide perturbations by disease mutations

D Xiong, Y Qiu, J Zhao, Y Zhou, D Lee, S Gupta… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Human genome sequencing studies have identified numerous loci associated with complex
diseases. However, translating human genetic and genomic findings to disease …

Structural Comparison for Identifying Protein Hotspots Using PhiDsc Method

MHA Hoballa, C Eslahchi - Journal of Applied Biotechnology Reports, 2023 - biotechrep.ir
Introduction: Somatic mutations in cancer are caused by a complex interaction of many
starting and driving factors that work together to create a unique mutational landscape …

Protein Networks in Human Disease

KM Poluri, K Gulati, DK Tripathi, N Nagar - Protein-Protein Interactions …, 2023 - Springer
Anomalies in protein–protein interactions may lead to a diseased state, as many cellular
functions are sustained by such interactions. These abnormal situations usually arise when …

Fragment-Based Drug Design in Lead Discovery

AM Oliveira, M Rudrapal - CADD and Informatics in Drug Discovery, 2023 - Springer
This chapter focuses on the main new drug development strategies using the fragment-
based drug design (FBDD) approach and its relationship with high-throughput screening …