Analysis of blood methylation quantitative trait loci in East Asians reveals ancestry-specific impacts on complex traits

Q Peng, X Liu, W Li, H Jing, J Li, X Gao, Q Luo… - Nature Genetics, 2024 - nature.com
Methylation quantitative trait loci (mQTLs) are essential for understanding the role of DNA
methylation changes in genetic predisposition, yet they have not been fully characterized in …

[HTML][HTML] Genetic control of DNA methylation is largely shared across European and East Asian populations

AA Hatton, FF Cheng, T Lin, RJ Shen, J Chen… - Nature …, 2024 - nature.com
DNA methylation is an ideal trait to study the extent of the shared genetic control across
ancestries, effectively providing hundreds of thousands of model molecular traits with large …

Integrative analysis of genetics, epigenetics and RNA expression data reveal three susceptibility loci for smoking behavior in Chinese Han population

MD Li, Q Liu, X Shi, Y Wang, Z Zhu, Y Guan, J He… - Molecular …, 2024 - nature.com
Despite numerous studies demonstrate that genetics and epigenetics factors play important
roles on smoking behavior, our understanding of their functional relevance and coordinated …

Genome-Wide Methylation Analysis Reveals a KCNK3-Prominent Causal Cascade on Hypertension

D Huang, W Shang, M Xu, Q Wan, J Zhang… - Circulation …, 2024 - Am Heart Assoc
BACKGROUND: Despite advances in understanding hypertension's genetic structure, how
noncoding genetic variants influence it remains unclear. Studying their interaction with DNA …

[HTML][HTML] Semimethylation is a feature of diffuse large B-cell lymphoma, and subgroups with poor prognosis are characterized by global hypomethylation and short …

O Carlund, E Thörn, P Osterman, M Fors, A Dernstedt… - Clinical …, 2024 - Springer
Background Large B-cell lymphoma (LBCL) is the most common lymphoma and is known to
be a biologically heterogeneous disease regarding genetic, phenotypic, and clinical …

Investigating the potential of single-cell DNA methylation data to detect allele-specific methylation and imprinting

ND Johnson, DJ Cutler, KN Conneely - The American Journal of Human …, 2024 - cell.com
Allele-specific methylation (ASM) is an epigenetic modification whereby one parental allele
becomes methylated and the other unmethylated at a specific locus. ASM is most often …

[HTML][HTML] Sex-dependent placental methylation quantitative trait loci provide insight into the prenatal origins of childhood onset traits and conditions

W Casazza, AM Inkster, GF Del Gobbo, V Yuan… - Iscience, 2024 - cell.com
Molecular quantitative trait loci (QTLs) allow us to understand the biology captured in
genome-wide association studies (GWASs). The placenta regulates fetal development and …

[HTML][HTML] Genome-wide analysis of hepatic DNA methylation reveals impact of epigenetic aging on xenobiotic metabolism and transport genes in an aged mouse …

S Abudahab, MM Kronfol, MG Dozmorov, T Campbell… - GeroScience, 2024 - Springer
Hepatic xenobiotic metabolism and transport decline with age, while intact xenobiotic
metabolism is associated with longevity. However, few studies have examined the genome …

Investigating the relationship between DNA methylation, genetic variation, and suicide attempt in bipolar disorder

A Alrfooh, LG Casten, JG Richards, JA Wemmie… - medRxiv, 2024 - medrxiv.org
Individuals with bipolar disorder are at increased risk for suicide, and this can be influenced
by a range of biological, clinical, and environmental risk factors. Biological components …

A hierarchical Bayesian interaction model to estimate cell-type-specific methylation quantitative trait loci incorporating priors from cell-sorted bisulfite sequencing data

Y Cheng, B Cai, H Li, X Zhang, G D'Souza, S Shrestha… - bioRxiv, 2024 - biorxiv.org
Background: Methylation Quantitative Trait Loci (meQTLs) are chromosomal regions that
harbor genetic variants affecting DNA methylation levels. The identification of meQTLs can …