Common changes in rat cortical gene expression after valproate or lithium treatment particularly affect pre-and post-synaptic pathways that regulate four …

B Dean, E Scarr - The World Journal of Biological Psychiatry, 2024 - Taylor & Francis
Objectives We have postulated that common changes in gene expression after treatment
with different therapeutic classes of psychotropic drugs contribute to their common …

[HTML][HTML] Complexity of human death: its physiological, transcriptomic, and microbiological implications

GT Javan, K Singh, SJ Finley, RL Green… - Frontiers in …, 2024 - frontiersin.org
Human death is a complex, time-governed phenomenon that leads to the irreversible
cessation of all bodily functions. Recent molecular and genetic studies have revealed …

Systematic druggable genome‐wide Mendelian randomization identifies therapeutic targets for sarcopenia

KF Yin, T Chen, XJ Gu, WM Su, Z Jiang… - Journal of Cachexia …, 2024 - Wiley Online Library
Background There are no effective pharmacological treatments for sarcopenia. We aim to
identify potential therapeutic targets for sarcopenia by integrating various publicly available …

Gene expression variation underlying tissue-specific responses to copper stress in Drosophila melanogaster

ER Everman, SJ Macdonald - G3: Genes, Genomes, Genetics, 2024 - academic.oup.com
Copper is one of a handful of biologically necessary heavy metals that is also a common
environmental pollutant. Under normal conditions, copper ions are required for many key …

[HTML][HTML] Genome-wide association study and haplotype analysis reveal novel candidate genes for resistance to powdery mildew in soybean

G Liu, Y Fang, X Liu, J Jiang, G Ding, Y Wang… - Frontiers in Plant …, 2024 - frontiersin.org
Powdery mildew disease (PMD) is caused by the obligate biotrophic fungus Microsphaera
diffusa Cooke & Peck (M. diffusa) and results in significant yield losses in soybean (Glycine …

Advancing fish breeding in aquaculture through genome functional annotation

IA Johnston, MP Kent, P Boudinot, M Looseley… - Aquaculture, 2024 - Elsevier
Genomics is increasingly applied in breeding programmes for farmed fish and shellfish
species around the world. However, current applications do not include information on …

Prioritizing Disease Diagnosis in Neonatal Cohorts through Multivariate Survival Analysis: A Nonparametric Bayesian Approach

J Seo, J Seok, Y Kim - Healthcare, 2024 - mdpi.com
Understanding the intricate relationships between diseases is critical for both prevention
and recovery. However, there is a lack of suitable methodologies for exploring the …

[HTML][HTML] Enhancing the Vietoris–Rips simplicial complex for topological data analysis: applications in cancer gene expression datasets

L Mashatola, Z Kader, N Abdulla, M Kaur - International Journal of Data …, 2024 - Springer
The aim of this study is to enhance the extraction of informative features from complex data
through the application of topological data analysis (TDA) using novel topological …

Distributed eQTL analysis with auxiliary information

Z Fang, G Li, W Li, X Pu, D Xiang - Journal of statistical planning and …, 2024 - Elsevier
Expression quantitative trait locus (eQTL) analysis is a useful tool to identify genetic loci that
are associated with gene expression levels. Large collaborative efforts such as the …

[HTML][HTML] The dawn of spatiotemporal transcriptomics

S Wang, S Lin, C Yang - Biomedical Analysis, 2024 - Elsevier
Gene expression of cells in the tissues is a heterogeneous and dynamic program across
space and time. Spatiotemporal transcriptomics technologies have emerged as transforming …