header

Prediction of Immune Checkpoint Inhibitors Treatment Response of Non-Small Cell Lung Cancer Patients from Serial Computed Tomography Scans Based on Global Self-Attention Mechanism

30 Pages Posted: 11 Dec 2023 Publication Status: Preprint

See all articles by Yuemin Wu

Yuemin Wu

Nanjing Medical University

Runwei Guan

University of Southampton

Xiao Liang

Nanjing Medical University

Wei Zhang

Nanjing Medical University

Yuqin Jiang

Nanjing Medical University

Xiao Liang

Nanjing Medical University

Wenxin Zhou

Nanjing Medical University

Qi Liang

Nanjing Medical University

Pengpeng Zhang

Nanjing Medical University

Yi Chen

Pukou Branch of Jiangsu People's Hospital

Jiali Dai

Nanjing Medical University

Chen Zhang

Nanjing Medical University

Jiali Xu

Soochow University - Department of Respiratory Medicine

Jun Li

Soochow University - Department of Respiratory Medicine

Tongfu Yu

Nanjing Medical University

Renhua Guo

Soochow University - Department of Respiratory Medicine

Abstract

Background: This study aimed to predict the response of NSCLC patients to immune checkpoint inhibitors (ICIs) by utilizing computed tomography (CT) images through deep learning methods.

Methods: The study retrospectively collected 624 serial CT images from 156 patients at Jiangsu Province Hospital, along with their clinical data.  The dataset was then divided into three cohorts: training (n=547), validation (n=64), and test (n=64).  Additionally, an external validation cohort included 37 CT images from 37 patients at Nanjing PuKou Peoples' Hospital, with comprehensive clinical data. Based on the modified Video Vision Transformer (ViViT) model with the global self-attention mechanism, patients who underwent ICIs treatment were analyzed to predict their response to immunotherapy. The performance of the ViViT model was evaluated using a confusion matrix and a receiver operating characteristic curve (ROC).

Results: The ViViT model exhibited predictive capabilities for ICIs response, with corresponding areas under the receiver operating characteristic curve (AUC) of 0.74 (95% CI: 0.69-0.78), 0.74 (95% CI: 0.61-0.86), 0.76 (95% CI: 0.62-0.88), and 0.69 (95% CI: 0.5-0.87) in the training, validation, test, and external validation sets, respectively. In the ViViT model, the overall accuracy was 0.74, 0.76, 0.75, and 0.68 in the training, validation, test, and external validation sets, respectively. The corresponding precision values were 0.80, 0.82, 0.81, and 0.63, recall values were 0.69, 0.75, 0.72, and 0.71, F1 values were 0.74, 0.78, 0.77, and 0.67, and specificity values were 0.80, 0.78, 0.78, and 0.65, respectively.

Conclusion: This study illustrates how a deep learning model provides a noninvasive means of predicting clinical outcomes for NSCLC patients undergoing immunotherapy. This model has the potential to significantly enhance personalized treatment strategies for lung cancer patients.

Note:
Funding Declaration: Financial support for this work was provided by grants from the National Natural Science Foundation of China (81972188, 82272669, and 82203010), the Medical Important Talents ofJiangsu Province (ZDRCA2016024), and the Cancer Foundation of China (CFCSSSQ017).

Conflicts of Interest: None

Ethical Approval: The study was approved by the Committee of Jiangsu Province Hospital of Nanjing MedicalUniversity (No. 2023-SR-111). The need for written informed consent was waived by theJiangsu Province Hospital ethics committee due to retrospective nature of the study.

Keywords: Deep Learning, immunotherapy, Global self-attention mechanism

Suggested Citation

Wu, Yuemin and Guan, Runwei and Liang, Xiao and Zhang, Wei and Jiang, Yuqin and Liang, Xiao and Zhou, Wenxin and Liang, Qi and Zhang, Pengpeng and Chen, Yi and Dai, Jiali and Zhang, Chen and Xu, Jiali and Li, Jun and Yu, Tongfu and Guo, Renhua, Prediction of Immune Checkpoint Inhibitors Treatment Response of Non-Small Cell Lung Cancer Patients from Serial Computed Tomography Scans Based on Global Self-Attention Mechanism. Available at SSRN: https://ssrn.com/abstract=4651302 or http://dx.doi.org/10.2139/ssrn.4651302

Yuemin Wu

Nanjing Medical University ( email )

Runwei Guan

University of Southampton ( email )

Xiao Liang

Nanjing Medical University ( email )

300 Guangzhou Road
Nanjing, 210029
China

Wei Zhang

Nanjing Medical University ( email )

Yuqin Jiang

Nanjing Medical University ( email )

Xiao Liang

Nanjing Medical University ( email )

Wenxin Zhou

Nanjing Medical University ( email )

Qi Liang

Nanjing Medical University ( email )

Pengpeng Zhang

Nanjing Medical University ( email )

Yi Chen

Pukou Branch of Jiangsu People's Hospital ( email )

Jiali Dai

Nanjing Medical University ( email )

Chen Zhang

Nanjing Medical University ( email )

Jiali Xu

Soochow University - Department of Respiratory Medicine ( email )

Jun Li

Soochow University - Department of Respiratory Medicine ( email )

Tongfu Yu

Nanjing Medical University ( email )

Renhua Guo (Contact Author)

Soochow University - Department of Respiratory Medicine ( email )

Do you have a job opening that you would like to promote on SSRN?

Paper statistics

Downloads
22
Abstract Views
95
PlumX Metrics