Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases

DB Kell - BMC medical genomics, 2009 - Springer
Background The production of peroxide and superoxide is an inevitable consequence of
aerobic metabolism, and while these particular'reactive oxygen species'(ROSs) can exhibit a …

[HTML][HTML] Open PHACTS: semantic interoperability for drug discovery

AJ Williams, L Harland, P Groth, S Pettifer… - Drug discovery today, 2012 - Elsevier
Open PHACTS is a public–private partnership between academia, publishers, small and
medium sized enterprises and pharmaceutical companies. The goal of the project is to …

Defrosting the digital library: bibliographic tools for the next generation web

D Hull, SR Pettifer, DB Kell - PLoS computational biology, 2008 - journals.plos.org
Many scientists now manage the bulk of their bibliographic information electronically,
thereby organizing their publications and citation material from digital libraries. However, a …

The national center for biomedical ontology

MA Musen, NF Noy, NH Shah… - Journal of the …, 2012 - academic.oup.com
Abstract The National Center for Biomedical Ontology is now in its seventh year. The goals
of this National Center for Biomedical Computing are to: create and maintain a repository of …

An overview of graph databases and their applications in the biomedical domain

S Timón-Reina, M Rincón, R Martínez-Tomás - Database, 2021 - academic.oup.com
Over the past couple of decades, the explosion of densely interconnected data has
stimulated the research, development and adoption of graph database technologies. From …

A substrate‐based ontology for human solute carriers

E Meixner, U Goldmann, V Sedlyarov… - Molecular Systems …, 2020 - embopress.org
Solute carriers (SLCs) are the largest family of transmembrane transporters in the human
genome with more than 400 members. Despite the fact that SLCs mediate critical biological …

Evaluation of research in biomedical ontologies

R Hoehndorf, M Dumontier… - Briefings in …, 2013 - academic.oup.com
Ontologies are now pervasive in biomedicine, where they serve as a means to standardize
terminology, to enable access to domain knowledge, to verify data consistency and to …

GOMMA: a component-based infrastructure for managing and analyzing life science ontologies and their evolution

T Kirsten, A Gross, M Hartung, E Rahm - Journal of biomedical semantics, 2011 - Springer
Background Ontologies are increasingly used to structure and semantically describe entities
of domains, such as genes and proteins in life sciences. Their increasing size and the high …

Empowering software maintainers with semantic web technologies

R Witte, Y Zhang, J Rilling - … Semantic Web: Research and Applications: 4th …, 2007 - Springer
Software maintainers routinely have to deal with a multitude of artifacts, like source code or
documents, which often end up disconnected, due to their different representations and the …

Cloud computing in e-Science: research challenges and opportunities

X Yang, D Wallom, S Waddington, J Wang… - The Journal of …, 2014 - Springer
Abstract Service-oriented architecture (SOA), workflow, the Semantic Web, and Grid
computing are key enabling information technologies in the development of increasingly …