Plant small RNAs: their biogenesis, regulatory roles, and functions

J Zhan, BC Meyers - Annual Review of Plant Biology, 2023 - annualreviews.org
Plant cells accumulate small RNA molecules that regulate plant development, genome
stability, and environmental responses. These small RNAs fall into three major classes …

The expanding world of small RNAs in plants

F Borges, RA Martienssen - Nature reviews Molecular cell biology, 2015 - nature.com
Plant genomes encode various small RNAs that function in distinct, yet overlapping, genetic
and epigenetic silencing pathways. However, the abundance and diversity of small-RNA …

RNA-directed DNA methylation

RM Erdmann, CL Picard - PLoS genetics, 2020 - journals.plos.org
RNA-directed DNA methylation (RdDM) is a biological process in which non-coding RNA
molecules direct the addition of DNA methylation to specific DNA sequences. The RdDM …

Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes

Q Cai, L Qiao, M Wang, B He, FM Lin, J Palmquist… - Science, 2018 - science.org
Some pathogens and pests deliver small RNAs (sRNAs) into host cells to suppress host
immunity. Conversely, hosts also transfer sRNAs into pathogens and pests to inhibit their …

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

MA Matzke, RA Mosher - Nature Reviews Genetics, 2014 - nature.com
RNA-directed DNA methylation (RdDM) is the major small RNA-mediated epigenetic
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …

[HTML][HTML] Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome

H Stroud, MVC Greenberg, S Feng, YV Bernatavichute… - Cell, 2013 - cell.com
Cytosine methylation is involved in various biological processes such as silencing of
transposable elements (TEs) and imprinting. Multiple pathways regulate DNA methylation in …

Classification and comparison of small RNAs from plants

MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …

RNA silencing suppression by plant pathogens: defence, counter-defence and counter-counter-defence

N Pumplin, O Voinnet - Nature Reviews Microbiology, 2013 - nature.com
RNA silencing is a central regulator of gene expression in most eukaryotes and acts both at
the transcriptional level through DNA methylation and at the post-transcriptional level …

The Diversity, Biogenesis, and Activities of Endogenous Silencing Small RNAs in Arabidopsis

NG Bologna, O Voinnet - Annual review of plant biology, 2014 - annualreviews.org
In eukaryotic RNA silencing, RNase-III classes of enzymes in the Dicer family process
double-stranded RNA of cellular or exogenous origin into small-RNA (sRNA) molecules …

Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks

Q Fei, R Xia, BC Meyers - The Plant Cell, 2013 - academic.oup.com
Plant genomes are the source of large numbers of small RNAs, generated via a variety of
genetically separable pathways. Several of these pathways converge in the production of …