[HTML][HTML] CLIP and complementary methods
RNA molecules start assembling into ribonucleoprotein (RNP) complexes during
transcription. Dynamic RNP assembly, largely directed by cis-acting elements on the RNA …
transcription. Dynamic RNP assembly, largely directed by cis-acting elements on the RNA …
A census of human RNA-binding proteins
Post-transcriptional gene regulation (PTGR) concerns processes involved in the maturation,
transport, stability and translation of coding and non-coding RNAs. RNA-binding proteins …
transport, stability and translation of coding and non-coding RNAs. RNA-binding proteins …
starBase v2. 0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
Although microRNAs (miRNAs), other non-coding RNAs (ncRNAs)(eg lncRNAs,
pseudogenes and circRNAs) and competing endogenous RNAs (ceRNAs) have been …
pseudogenes and circRNAs) and competing endogenous RNAs (ceRNAs) have been …
In the right place at the right time: visualizing and understanding mRNA localization
The spatial regulation of protein translation is an efficient way to create functional and
structural asymmetries in cells. Recent research has furthered our understanding of how …
structural asymmetries in cells. Recent research has furthered our understanding of how …
FMRP targets distinct mRNA sequence elements to regulate protein expression
Fragile X syndrome (FXS) is a multi-organ disease that leads to mental retardation, macro-
orchidism in males and premature ovarian insufficiency in female carriers. FXS is also a …
orchidism in males and premature ovarian insufficiency in female carriers. FXS is also a …
Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo
The molecular roles of many RNA‐binding proteins in bacterial post‐transcriptional gene
regulation are not well understood. Approaches combining in vivo UV crosslinking with RNA …
regulation are not well understood. Approaches combining in vivo UV crosslinking with RNA …
Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression
More than half of human genes use alternative cleavage and polyadenylation (ApA) to
generate mRNA transcripts that differ in the lengths of their 3′ untranslated regions (UTRs) …
generate mRNA transcripts that differ in the lengths of their 3′ untranslated regions (UTRs) …
RNA methyltransferase METTL16: Targets and function
ER Satterwhite, KD Mansfield - Wiley Interdisciplinary Reviews …, 2022 - Wiley Online Library
Abstract The N6‐methyladenosine (m6A) RNA methyltransferase METTL16 is an emerging
player in the RNA modification landscape of the human cell. Originally thought to be a …
player in the RNA modification landscape of the human cell. Originally thought to be a …
Purification of cross-linked RNA-protein complexes by phenol-toluol extraction
EC Urdaneta, CH Vieira-Vieira, T Hick… - Nature …, 2019 - nature.com
Recent methodological advances allowed the identification of an increasing number of RNA-
binding proteins (RBPs) and their RNA-binding sites. Most of those methods rely, however …
binding proteins (RBPs) and their RNA-binding sites. Most of those methods rely, however …
How cells get the message: dynamic assembly and function of mRNA–protein complexes
M Müller-McNicoll, KM Neugebauer - Nature Reviews Genetics, 2013 - nature.com
Abstract mRNA is packaged into ribonucleoprotein particles called mRNPs. A multitude of
RNA-binding proteins as well as a host of associated proteins participate in the fate of …
RNA-binding proteins as well as a host of associated proteins participate in the fate of …