[HTML][HTML] Mitochondrial dysfunction in type 2 diabetes mellitus: an organ-based analysis

MV Pinti, GK Fink, QA Hathaway… - American Journal …, 2019 - journals.physiology.org
Type 2 diabetes mellitus (T2DM) is a systemic disease characterized by hyperglycemia,
hyperlipidemia, and organismic insulin resistance. This pathological shift in both circulating …

Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
Methylation of cytosine bases in DNA provides a layer of epigenetic control in many
eukaryotes that has important implications for normal biology and disease. Therefore …

Predicting multicellular function through multi-layer tissue networks

M Zitnik, J Leskovec - Bioinformatics, 2017 - academic.oup.com
Motivation Understanding functions of proteins in specific human tissues is essential for
insights into disease diagnostics and therapeutics, yet prediction of tissue-specific cellular …

[HTML][HTML] High density DNA methylation array with single CpG site resolution

M Bibikova, B Barnes, C Tsan, V Ho, B Klotzle, JM Le… - Genomics, 2011 - Elsevier
We have developed a new generation of genome-wide DNA methylation BeadChip which
allows high-throughput methylation profiling of the human genome. The new high density …

SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips

J Maksimovic, L Gordon, A Oshlack - Genome biology, 2012 - Springer
DNA methylation is the most widely studied epigenetic mark and is known to be essential to
normal development and frequently disrupted in disease. The Illumina …

Dynamic DNA methylation across diverse human cell lines and tissues

KE Varley, J Gertz, KM Bowling, SL Parker… - Genome …, 2013 - genome.cshlp.org
As studies of DNA methylation increase in scope, it has become evident that methylation has
a complex relationship with gene expression, plays an important role in defining cell types …

Genome-wide DNA methylation analysis of human pancreatic islets from type 2 diabetic and non-diabetic donors identifies candidate genes that influence insulin …

T Dayeh, P Volkov, S Salö, E Hall, E Nilsson… - PLoS …, 2014 - journals.plos.org
Impaired insulin secretion is a hallmark of type 2 diabetes (T2D). Epigenetics may affect
disease susceptibility. To describe the human methylome in pancreatic islets and determine …

DNA extracted from saliva for methylation studies of psychiatric traits: evidence tissue specificity and relatedness to brain

AK Smith, V Kilaru, T Klengel, KB Mercer… - American Journal of …, 2015 - Wiley Online Library
DNA methylation has become increasingly recognized in the etiology of psychiatric
disorders. Because brain tissue is not accessible in living humans, epigenetic studies are …

Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context

BC Christensen, EA Houseman, CJ Marsit… - PLoS …, 2009 - journals.plos.org
Epigenetic control of gene transcription is critical for normal human development and
cellular differentiation. While alterations of epigenetic marks such as DNA methylation have …

Child health, developmental plasticity, and epigenetic programming

Z Hochberg, R Feil, M Constancia, M Fraga… - Endocrine …, 2011 - academic.oup.com
Plasticity in developmental programming has evolved in order to provide the best chances of
survival and reproductive success to the organism under changing environments …