Protein diffusion along Protein and DNA lattices: role of electrostatics and disordered regions

LS Bigman, Y Levy - Annual review of biophysics, 2023 - annualreviews.org
Diffusion is a pervasive process present in a broad spectrum of cellular reactions. Its
mathematical description has existed for nearly two centuries and permits the construction of …

Real-time imaging of single-molecule enzyme cascade using a DNA origami raft

L Sun, Y Gao, Y Xu, J Chao, H Liu… - Journal of the …, 2017 - ACS Publications
The dynamics of enzymes are directly associated with their functions in various biological
processes. Nevertheless, the ability to image motions of single enzymes in a highly parallel …

K-Ras4B remains monomeric on membranes over a wide range of surface densities and lipid compositions

JK Chung, YK Lee, JP Denson, WK Gillette, S Alvarez… - Biophysical journal, 2018 - cell.com
Ras is a membrane-anchored signaling protein that serves as a hub for many signaling
pathways and also plays a prominent role in cancer. The intrinsic behavior of Ras on the …

Regulation of PI3K by PKC and MARCKS: single-molecule analysis of a reconstituted signaling pathway

BP Ziemba, JE Burke, G Masson, RL Williams… - Biophysical journal, 2016 - cell.com
In chemotaxing ameboid cells, a complex leading-edge signaling circuit forms on the
cytoplasmic leaflet of the plasma membrane and directs both actin and membrane …

Single-molecule study reveals how receptor and ras synergistically activate PI3Kα and PIP3 signaling

TC Buckles, BP Ziemba, GR Masson, RL Williams… - Biophysical …, 2017 - cell.com
Cellular pathways controlling chemotaxis, growth, survival, and oncogenesis are activated
by receptor tyrosine kinases and small G-proteins of the Ras superfamily that stimulate …

Interplay between phosphoinositide lipids and calcium signals at the leading edge of chemotaxing ameboid cells

JJ Falke, BP Ziemba - Chemistry and physics of lipids, 2014 - Elsevier
The chemotactic migration of eukaryotic ameboid cells up concentration gradients is among
the most advanced forms of cellular behavior. Chemotaxis is controlled by a complex …

Lateral diffusion of peripheral membrane proteins on supported lipid bilayers is controlled by the additive frictional drags of (1) bound lipids and (2) protein domains …

BP Ziemba, JJ Falke - Chemistry and physics of lipids, 2013 - Elsevier
Peripheral membrane proteins bound to lipids on bilayer surfaces play central roles in a
wide array of cellular processes, including many signaling pathways. These proteins diffuse …

Cytosolic proteins can exploit membrane localization to trigger functional assembly

ON Yogurtcu, ME Johnson - PLoS computational biology, 2018 - journals.plos.org
Cell division, endocytosis, and viral budding would not function without the localization and
assembly of protein complexes on membranes. What is poorly appreciated, however, is that …

Cell patterning by secretion-induced plasma membrane flows

V Gerganova, I Lamas, DM Rutkowski, A Vještica… - Science …, 2021 - science.org
Cells self-organize using reaction-diffusion and fluid-flow principles. Whether bulk
membrane flows contribute to cell patterning has not been established. Here, using …

Superdiffusive motion of membrane-targeting C2 domains

G Campagnola, K Nepal, BW Schroder, OB Peersen… - Scientific reports, 2015 - nature.com
Membrane-targeting domains play crucial roles in the recruitment of signalling molecules to
the plasma membrane. For most peripheral proteins, the protein-to-membrane interaction is …