A guide to antigen processing and presentation

N Pishesha, TJ Harmand, HL Ploegh - Nature Reviews Immunology, 2022 - nature.com
Antigen processing and presentation are the cornerstones of adaptive immunity. B cells
cannot generate high-affinity antibodies without T cell help. CD4+ T cells, which provide …

The landscape of T cell antigens for cancer immunotherapy

A Peri, N Salomon, Y Wolf, S Kreiter, M Diken… - Nature cancer, 2023 - nature.com
The remarkable capacity of immunotherapies to induce durable regression in some patients
with metastatic cancer relies heavily on T cell recognition of tumor-presented antigens. As …

Tryptophan depletion results in tryptophan-to-phenylalanine substitutants

A Pataskar, J Champagne, R Nagel, J Kenski, M Laos… - Nature, 2022 - nature.com
Activated T cells secrete interferon-γ, which triggers intracellular tryptophan shortage by
upregulating the indoleamine 2, 3-dioxygenase 1 (IDO1) enzyme,,–. Here we show that …

Aminoacyl-tRNA synthetases

MAR Gomez, M Ibba - Rna, 2020 - rnajournal.cshlp.org
The aminoacyl-tRNA synthetases are an essential and universally distributed family of
enzymes that plays a critical role in protein synthesis, pairing tRNAs with their cognate …

Transfer RNAs as dynamic and critical regulators of cancer progression

AM Pinzaru, SF Tavazoie - Nature Reviews Cancer, 2023 - nature.com
Transfer RNAs (tRNAs) have been historically viewed as non-dynamic adaptors that decode
the genetic code into proteins. Recent work has uncovered dynamic regulatory roles for …

The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis

P Schimmel - Nature reviews Molecular cell biology, 2018 - nature.com
The discovery of the genetic code and tRNAs as decoders of the code transformed life
science. However, after establishing the role of tRNAs in protein synthesis, the field moved …

Reversible, specific, active aggregates of endogenous proteins assemble upon heat stress

EWJ Wallace, JL Kear-Scott, EV Pilipenko… - Cell, 2015 - cell.com
Heat causes protein misfolding and aggregation and, in eukaryotic cells, triggers
aggregation of proteins and RNA into stress granules. We have carried out extensive …

Towards a systems understanding of MHC class I and MHC class II antigen presentation

J Neefjes, MLM Jongsma, P Paul… - Nature reviews …, 2011 - nature.com
The molecular details of antigen processing and presentation by MHC class I and class II
molecules have been studied extensively for almost three decades. Although the basic …

Emerging roles of tRNA in adaptive translation, signalling dynamics and disease

S Kirchner, Z Ignatova - Nature Reviews Genetics, 2015 - nature.com
Abstract tRNAs, nexus molecules between mRNAs and proteins, have a central role in
translation. Recent discoveries have revealed unprecedented complexity of tRNA …

Non-mutational neoantigens in disease

LJ Stern, C Clement, L Galluzzi, L Santambrogio - Nature immunology, 2024 - nature.com
The ability of mammals to mount adaptive immune responses culminating with the
establishment of immunological memory is predicated on the ability of the mature T cell …