Variation within the non-coding genome influences genetic and epigenetic regulation of the human leukocyte antigen genes

T Arumugam, T Adimulam, A Gokul… - Frontiers in …, 2024 - frontiersin.org
Variation within the non-coding genome may influence the regulation and expression of
important genes involved in immune control such as the human leukocyte antigen (HLA) …

[HTML][HTML] The Goat Cytotoxic T Lymphocyte-Associated Antigen-4 Gene: mRNA Expression and Association Analysis of Insertion/Deletion Variants with the Risk of …

C Wang, X Liu, Z Ren, X Du, N Li, X Song… - International Journal of …, 2024 - mdpi.com
The cytotoxic T lymphocyte-associated antigen-4 (CTLA4) gene, a member of the
immunoglobulin superfamily, is crucial for maintaining immune homeostasis and preventing …

[HTML][HTML] Minimal phenotypes in transgenic mice with the human LOXL1/LOXL1-AS1 locus associated with exfoliation glaucoma

KJ Meyer, HE Mercer, BR Roos, JH Fingert… - Vision Research, 2024 - Elsevier
Exfoliation syndrome is a leading cause of secondary glaucoma worldwide. Among the risk-
factors for exfoliation syndrome and exfoliation glaucoma that have been investigated, a …

MotifbreakR v2: extended capability and database integration

SG Coetzee, DJ Hazelett - arXiv preprint arXiv:2407.03441, 2024 - arxiv.org
MotifbreakR is a software tool that scans genetic variants against position weight matrices of
transcription factors (TF) to determine the potential for the disruption of TF binding at the site …

Cardiovascular Disease-Associated Non-Coding Variants Disrupt GATA4-DNA Binding and Regulatory Functions

EG Peña-Martínez, JL Messon-Bird… - bioRxiv, 2024 - biorxiv.org
Genome-wide association studies have mapped over 90% of cardiovascular disease (CVD)-
associated variants within the non-coding genome. Non-coding variants in regulatory …

A long-context RNA foundation model for predicting transcriptome architecture

A Saberi, B Choi, S Wang, A Hernández-Corchado… - bioRxiv, 2024 - biorxiv.org
Linking DNA sequence to genomic function remains one of the grand challenges in genetics
and genomics. Here, we combine large-scale single-molecule transcriptome sequencing of …

CRISPR/Cas9-mediated epigenetic repression of an enhancer linked to visceral obesity

TCK Ngan - 2024 - bora.uib.no
Projects like the Human Genome Project, ENCODE, and RoadMap Epigenomics have
enabled genome-wide association studies (GWAS) to map associations between genetic …

Role of Endogenous and Exogenous Factors in Chronic Disease Development and Progression

DA Leone - 2024 - search.proquest.com
Genetic and molecular factors associated with chronic lung and kidney disease
susceptibility, leading causes of domestic and global mortality, remain largely unexplained …

Reti neurali convoluzionali per lo studio di varianti non codificanti in sequenze genomiche

A TRIGOLO - thesis.unipd.it
Le mutazioni non codificanti, aree del genoma che non vengono codificate in proteine, sono
la principale causa dei disturbi genetici, tra cui le malattie mendeliane. Gli effetti funzionali di …